| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_0338 |
|---|
| Symbol | |
|---|
| ID | 7108956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 371874 |
|---|
| End bp | 372914 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643478613 |
|---|
| Product | rfaE bifunctional protein |
|---|
| Protein accession | YP_002375674 |
|---|
| Protein GI | 218437345 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
|---|
| TIGRFAM ID | [TIGR02198] rfaE bifunctional protein, domain I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCCT ATTCTTCTTT TATCTCTCAA CTCGCTCCCA ATAGCGATCG CTTTTTCTCC
TTATTGGATC GGTTTAACCA AGCTAAAATA TTGGTGATCG GAGACTTAAC CCTAGATGAA
TTTTTAACCG GTCAAGTCGA GCGAATTTCT AGAGAAGCAC CGGTTTTAAT TCTACGTCAT
GAAAATACCC GACAAATTCC TGGGGGTGGG GCAAATGCGG TCTATAATTT AGCTAAATTG
GGAGCTAACG TTAAAGTAGC CGGATTAGTC GGAAAAGATA TCCAAGGGGA AGCATTACGC
CATATTTTTG AGCAGGCCGG CATAGAAACC AAGGGGATAT TATTAGATAG CGATCGTCCT
ACGGTAACAA AAACTCGGAT TTCTGGCCAT GCGCGTCAGT CGGTTACTCA ACAAATAGTC
AGAGTCGATC GTAAATCTGA TGAGTTACCC GATCTTAAAT TACAGCAAGA TTTAGCCGAG
TATATCTATC AAGAATGTAG TAACGTGGAT GCGGTTGTCT GTTCAGACTA TGGGGATGGA
GTATTTACCC CCTCGGTGAT TAAAGCAAGT TTAACTCATT CTCAAGTGAT TGTAGACACT
CAAAAAGACT TAAATCGTTA TCAGGGTGCA ACTCTATTTA CGCCTAATTT ACCCGAAGCA
GAACTCGCTG TCGGTTATTC TATAAAAACT CCCGAAACCC TACAACAAGC CGGAGAAGAT
TTACTCTACT TAACCGGGGC TAAATTAATG TTAATTACTC GCGGAGAAGA GGGGATGACT
GGGTTTGAAA GAAAAGGAGA AGAAATTGTC TCTTGGCATA TTCCGGCTTT TAATCGTACC
GATGTATTTG ATGTGACCGG TGCAGGAGAT ACGGTGGTTG CTGCATTAAC CTTGGGGTTA
TGTGTGGGGG GTTCATTTTG GGAAGCCGCT ATTTTAGGAA ATTTAGCCGC TAGTCTTGTT
GTGCGTCAAT TTGGGACAGC CACCACCTCT ATTGAGGAAA TGAAAGAAGC CTTTAAATTA
TTCTTAGAAG AAGGAATTTA A
|
|---|
| Protein sequence | MTSYSSFISQ LAPNSDRFFS LLDRFNQAKI LVIGDLTLDE FLTGQVERIS REAPVLILRH
ENTRQIPGGG ANAVYNLAKL GANVKVAGLV GKDIQGEALR HIFEQAGIET KGILLDSDRP
TVTKTRISGH ARQSVTQQIV RVDRKSDELP DLKLQQDLAE YIYQECSNVD AVVCSDYGDG
VFTPSVIKAS LTHSQVIVDT QKDLNRYQGA TLFTPNLPEA ELAVGYSIKT PETLQQAGED
LLYLTGAKLM LITRGEEGMT GFERKGEEIV SWHIPAFNRT DVFDVTGAGD TVVAALTLGL
CVGGSFWEAA ILGNLAASLV VRQFGTATTS IEEMKEAFKL FLEEGI
|
|---|
| |