Gene PC1_4253 details

Gene Information

• Locus tag: PC1_4253
• ID: 8135256
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 4812702
• End bp: 4813172
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 644867575
• Product: F0F1 ATP synthase subunit B
• Protein accession: YP_003019803
• Protein GI: 253690613
• COG category: [C] Energy production and conversion
• COG ID: [COG0711] F0F1-type ATP synthase, subunit b
• TIGRFAM ID: [TIGR01144] ATP synthase, F0 subunit b

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.0299011
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAATATTA ATGCAACAAT CCTCGGCCAG GCCATTGCGT TCGTCCTGTT TGTCTGGTTC 
TGCATGAAGT ATGTATGGCC GCCGATGATG GCAGCCATCG AGAAACGTCA GAAAGAAATT 
GCTGACGGTT TAGCTTCTGC TGAACGTGCC AAAAAAGATT TGAACTTGGC TCAGGCCAAT 
GCGACAGATC AACTGAAGAA AGCCAAAGCG GATGCTCAGG TTATCATCGA GCAGGCGAAC 
AAACGCCGTG CTCAGATCCT GGATGAGGCG AAAGCTGAAG CGGAAGCTGA ACGTAACAAG 
ATTGTGGCGC AGGCGCAGGC TGAAATCGAA GCCGAACGTA AACGCGCTCG TGAAGAGCTG 
CGTAAGCAAG TTGCCGTATT GGCGATTGCC GGTGCCGAGA AAATTATTGA ACGTTCCGTG 
GATGAAGCTG CTAACAGCGA CATCGTTGAT AAACTGGTCG CTGAACTGTA A 

 

Protein sequence

MNINATILGQ AIAFVLFVWF CMKYVWPPMM AAIEKRQKEI ADGLASAERA KKDLNLAQAN 
ATDQLKKAKA DAQVIIEQAN KRRAQILDEA KAEAEAERNK IVAQAQAEIE AERKRAREEL 
RKQVAVLAIA GAEKIIERSV DEAANSDIVD KLVAEL