Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_4239 |
Symbol | |
ID | 8135242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4797395 |
End bp | 4797790 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644867561 |
Product | hypothetical protein |
Protein accession | YP_003019789 |
Protein GI | 253690599 |
COG category | [S] Function unknown |
COG ID | [COG3111] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00156] conserved hypothetical protein TIGR00156 |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.270372 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAG CAGCTGCGTT ACTCGCCATT ACCGCTCTGG TTTCTGCACC GGTATTTGCC GCGCAAAGCG GCGGTGGTTT CGTCAATCCT GAAACGCCAG CGGTTGGTAC ACATAAAGGG GGATTTGTTG ATCCCCAGAA TTCCCTCACC ACGGTAGATA AGGCTAAAGA TCTGCGTGAC GATAGTTGGG TTACGCTGAG CGGCAATATT GAAAAACGGA CCGGTGATGA GAACTATCTG TTCCGCGATG CGACGGGCAC GATGGAAGTC GAGATTGATC ACAAGCGCTG GAATGGCCAG ATGATTTCAC CCACCGATAA AGTGGAAATT CAGGGGGAAC TGGATAAAGA CTTCAATTCC GTCGAACTGG ATGTGAAGCA GATTCGTAAA CTCTAA
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Protein sequence | MKKAAALLAI TALVSAPVFA AQSGGGFVNP ETPAVGTHKG GFVDPQNSLT TVDKAKDLRD DSWVTLSGNI EKRTGDENYL FRDATGTMEV EIDHKRWNGQ MISPTDKVEI QGELDKDFNS VELDVKQIRK L
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