| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4237 |
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| Symbol | |
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| ID | 8135240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4795057 |
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| End bp | 4796562 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644867559 |
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| Product | D-ribose transporter ATP binding protein |
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| Protein accession | YP_003019787 |
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| Protein GI | 253690597 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0287863 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACCTT TACTGCAACT GCAAGGCATC ACGAAATCTT TTCCCGGCGT TAAGGCGCTG
TCCGGTGCGG CGCTCAACGT CTATCCGGGA AAAGTGATGG CGCTGGTGGG CGAGAACGGT
GCGGGCAAGT CCACCATGAT GAAAGTCCTG ACCGGGATCT ACCGTAAAGA TGCCGGCAGC
ATCCATTTTC TGGGGCAGGA GGTGGATTTC AACGGGCCGA AAGCGTCTCA GGAAGCTGGT
ATCGGTATTA TCCATCAGGA ACTTAACCTG ATTCCCCAGC TTACGATTGC TGAGAATATT
TTTCTCGGGC GTGAGTTTAC TAACCGTTTT GGCCGTCTCG ACTGGAATAA GATGTATGCG
GAAGCCGACA AGCTGCTGAA ACGCCTTAAT CTGCGCTACG ACAGCCGCCG TATGGTCGGG
GATTTATCGA TTGGCGATCA GCAAATGGTG GAAATTGCCA AGGTGCTGAG CTTTGAATCG
AAAGTCATCA TCATGGATGA ACCTACCGAT GCCCTGACGG ATACCGAAAC CGCTTCGCTA
TTCAGCGTGA TCAAAGAGCT GCAATCTCAA GGATGCGGCA TTGTCTATAT TTCCCACCGT
CTGAAAGAAA TCTTTGAAAT CTGCGATGAC ATTACCGTTT TCCGCGATGG TCAGTTTATC
GGTGAGCGCC CGGTCAGTGA CCTACAGGAA GATACGCTGA TTGAAATGAT GGTGGGCCGC
AAGCTGGAAG ATCAGTACCC ACGTTCGAGT AAAGTGCCTG GAGAGGTTCG CCTTAAGGTG
CAAAACCTGT CCGGGCCGGG CGTCGACAGC GTCAGCTTTA CGGTGCGGAA AGGCGAAATT
CTGGGCGTCG CTGGGCTGAT GGGCGCGGGT CGTACCGAGC TGATGAAGAT TCTTTACGGC
GCACTGCCGC GCACTGGCGG CAATGTGACG CTTGATGGCC GTGATGTGGT GACCCGGAAA
CCGCAGGATG GTTTAGCGAA CGGCATCGTT TATATATCGG AAGACCGTAA GCGTGATGGC
CTGGTGTTGG GCATGTCGGT AAAAGAAAAC ATGTCGTTAA CCGCACTGCG CTATTTCAGC
CATGCGGGCG GTCGTCTGAA ACATGCCGAA GAGCAATTAA CGGTTGCCGA CTTTATTCGC
CTGTTCAACG TTAAAACGCC GTCAATGGAG CAGCCTATCG GCCTGCTTTC CGGTGGTAAT
CAGCAAAAAG TGGCGATTGC CCGCGGCCTG ATGACGCGTC CGAATGTCCT GATCCTCGAT
GAACCGACGC GTGGTGTCGA TGTCGGGGCG AAGAAAGAAA TTTATCAGTT AATCAATCAA
TTCAAAGAAG AAGGGCTGAG TATCATATTG GTGTCATCCG AAATGCCCGA AGTCTTGGGA
ATGAGCGATC GCATCATTGT GATGCACGAG GGGCGCTTGA GCGGTGATTT CGCGATTGAG
CAAGCAACCC AGGAAGTACT GATGGCTGCG GCCGTTGGTA AGCAATACGG CGCAAAGCAG
GAGTAA
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| Protein sequence | MQPLLQLQGI TKSFPGVKAL SGAALNVYPG KVMALVGENG AGKSTMMKVL TGIYRKDAGS
IHFLGQEVDF NGPKASQEAG IGIIHQELNL IPQLTIAENI FLGREFTNRF GRLDWNKMYA
EADKLLKRLN LRYDSRRMVG DLSIGDQQMV EIAKVLSFES KVIIMDEPTD ALTDTETASL
FSVIKELQSQ GCGIVYISHR LKEIFEICDD ITVFRDGQFI GERPVSDLQE DTLIEMMVGR
KLEDQYPRSS KVPGEVRLKV QNLSGPGVDS VSFTVRKGEI LGVAGLMGAG RTELMKILYG
ALPRTGGNVT LDGRDVVTRK PQDGLANGIV YISEDRKRDG LVLGMSVKEN MSLTALRYFS
HAGGRLKHAE EQLTVADFIR LFNVKTPSME QPIGLLSGGN QQKVAIARGL MTRPNVLILD
EPTRGVDVGA KKEIYQLINQ FKEEGLSIIL VSSEMPEVLG MSDRIIVMHE GRLSGDFAIE
QATQEVLMAA AVGKQYGAKQ E
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