| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4224 |
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| Symbol | |
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| ID | 8135223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4775429 |
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| End bp | 4776802 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644867542 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_003019774 |
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| Protein GI | 253690584 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.365232 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGATAC CGTCCGTTGA CTGGGATCTG GCCCTGATTC AAAAATATAA CTATTCCGGG
CCGCGTTATA CGTCTTATCC CACAGCGTTA GAATTCAGTG AAGCTTACGA TGAGCCAGCG
TTTCAGCAGG CCATTGCCCG TTATCCTCAG CGACCGCTGT CGCTGTACAT CCACATCCCT
TTTTGCCATC GGCTGTGCTA TTTCTGTGGC TGTAATAAGC TGGTTACGCG TCAGCAGCAT
AAAGCGGATG AATATCTTGA TGTGCTGGAG CAGGAAATTC GCCAGCGTGC GCCGCTATTC
GCTGGACGAA CGGTGACGCA ATTGCATTGG GGCGGCGGTA CGCCAACCTA CCTGAATAAA
GTACAAATCA GCCGACTGAT GTCGCTGCTG CGCGAACTGT TCTCTTTTTC CGAGCAGGCT
GAGCTGTCGC TTGAAGTCGA TCCGCGAGAA ATTGAGCTGG ATGTCCTCGA TCATTTGCGT
GCCGAAGGGT TTAATCGCCT GAGCATGGGT GTGCAGGATT TTAATAAAGA CGTTCAGAAG
CTGGTTAATC GCGAGCAGGA TGAAGACTTT ATTTTTGCCC TCATTGAGCG AGCAAAGGCG
CTGGGCTTCA CTTCAACTAA CATCGATTTG ATTTATGGCC TGCCGAAGCA AACGCCGGAA
AGCTTCGCCT TTACGCTACA GCGCGTTGCG GCATTAAGCC CGCACCGGCT GAGCGTTTTT
AACTATGCGC ATCTACCCAG TCTGTTCGCG GCACAGCGCA AGATTAAAGA AGCGGATTTA
CCGAGCGCGG AGCAAAAGCT GGATATTCTG CAACAGACGA TTGGGTCGCT GACGCAATCG
GGCTATCAGT TTATCGGTAT GGATCACTTT GCTCGCCCGG ACGATGAGCT GGCGGTAGCA
CAGCGAGAAG GGAAACTGCA CCGCAATTTC CAAGGCTATA CGACACAGGG CGATAGCGAT
CTGCTTGGGA TGGGTGTTTC GGCGATTAGT ATGATCGGTG ATAGCTATGC TCAGAACCAG
AAGGAGCTAA AGCAGTATTA TGCGCAGGTC AAAGACAAAG GAAATGGCCT GTGGCGCGGG
TTACAGCTGA CGCGTGACGA TTGCCTTCGT CGCGATGTGA TTAAGACGTT AATCTGTAAT
TTCCAACTCA GCTATGCGCC CATTGAAGCA GAATATGCGG TCGATTTTAA AACCTACTTT
GAGCAGGATT TAGCGTTATT GGCTCCGCTG GTGGCTGATG GGCTGGTCGA TAGTCAGGAA
GACGGGCTGG TGGTGACGCC GAAAGGGCGT CTGCTTATCC GCAATATCTG TATGTGCTTT
GACGTCTACC TGCGTAACAA GCTCAGAACG CAGCAATTTT CCCGCGTGAT TTAA
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| Protein sequence | MSIPSVDWDL ALIQKYNYSG PRYTSYPTAL EFSEAYDEPA FQQAIARYPQ RPLSLYIHIP
FCHRLCYFCG CNKLVTRQQH KADEYLDVLE QEIRQRAPLF AGRTVTQLHW GGGTPTYLNK
VQISRLMSLL RELFSFSEQA ELSLEVDPRE IELDVLDHLR AEGFNRLSMG VQDFNKDVQK
LVNREQDEDF IFALIERAKA LGFTSTNIDL IYGLPKQTPE SFAFTLQRVA ALSPHRLSVF
NYAHLPSLFA AQRKIKEADL PSAEQKLDIL QQTIGSLTQS GYQFIGMDHF ARPDDELAVA
QREGKLHRNF QGYTTQGDSD LLGMGVSAIS MIGDSYAQNQ KELKQYYAQV KDKGNGLWRG
LQLTRDDCLR RDVIKTLICN FQLSYAPIEA EYAVDFKTYF EQDLALLAPL VADGLVDSQE
DGLVVTPKGR LLIRNICMCF DVYLRNKLRT QQFSRVI
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