| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4221 |
|---|
| Symbol | glnL |
|---|
| ID | 8135220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | + |
|---|
| Start bp | 4772634 |
|---|
| End bp | 4773683 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644867539 |
|---|
| Product | nitrogen regulation protein NR(II) |
|---|
| Protein accession | YP_003019771 |
|---|
| Protein GI | 253690581 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.314539 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACAG GCACGCTGCC CGATGCTGGG CAGATCCTAA ATTCCCTGAT AAACAGCATC
TTATTGCTGG ATAACGATCT GGCTATTCAC TATTCCAACC CGGCAGCACA GCAATTACTG
GCACAAAGCT CGCGTAAATT ATCTGGCACA CCGCTGCCCG ATTTGCTGGG ATACTTTTCT
CTGAATATCG ATTTACTGCG TGAAAGTCTG GATTCAGGGC AAGGTTTTAC GGATAACGAA
GTCACTCTCG TCGTAGATGC TAAAGCGCAC ATCATGTCGC TCACCGCTCA GCGGGTACAA
AACGATTTTA TCCTACTGGA AATGGCGCCG ATGGATAACC AGCGCCGTCT CAGTCAGGAA
CAGCTTCAAC ATGCACAACA GCAGGCTGCC CGTGATTTAG TCCGGGGTCT GGCGCATGAG
ATAAAAAATC CGCTTGGCGG ATTACGCGGT GCCGCACAGT TGCTTGCTAA AGCCTTGCCC
GATCCGGCAT TGACAGAATA TACCAAGGTC ATCATCGAAC AGGCGGACCG CCTGCGTAAT
TTGGTCGATC GCCTGCTCGG GCCTCAGCAG CCCGGCCTGC ACGTCACTCA AAGTATCCAT
CAGGTCGCCG AACGCGTTTG TCAACTCGTG TCACTGGAAA AGCCAGACAA TGTAACGCTG
GTGAAAGACT ATGATCCCAG CCTGCCAGAG CTGACGCACG ACCCTGACCA GATTGAACAG
GTACTGCTGA ATATTACCCG TAATGCGCTA CAGGCGCTGG GCGAGGAAGG CGGAACGATT
ACGATACGTA CCCGCACGGC TTTTCAGCTT ACGTTACACG GCGTGCGCTA TCGCCTCGCC
GCACGTATTG ACGTGGAAGA TGACGGCCCC GGCGTACCGG CTCAACTTCA GGACACACTG
TTTTACCCGA TGGTGAGCGG GCGCGAAGGG GGAACCGGTT TAGGGCTTTC CATCGCCCGC
AGTCTTATCG ACCAGCACTC CGGTAAAATT GAATTTAACA GTTGGCCAGG ACACACCGAA
TTCTCGGTTT ACCTGCCCAT TCGCCAGTGA
|
|---|
| Protein sequence | MATGTLPDAG QILNSLINSI LLLDNDLAIH YSNPAAQQLL AQSSRKLSGT PLPDLLGYFS
LNIDLLRESL DSGQGFTDNE VTLVVDAKAH IMSLTAQRVQ NDFILLEMAP MDNQRRLSQE
QLQHAQQQAA RDLVRGLAHE IKNPLGGLRG AAQLLAKALP DPALTEYTKV IIEQADRLRN
LVDRLLGPQQ PGLHVTQSIH QVAERVCQLV SLEKPDNVTL VKDYDPSLPE LTHDPDQIEQ
VLLNITRNAL QALGEEGGTI TIRTRTAFQL TLHGVRYRLA ARIDVEDDGP GVPAQLQDTL
FYPMVSGREG GTGLGLSIAR SLIDQHSGKI EFNSWPGHTE FSVYLPIRQ
|
|---|
| |