Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_4167 |
Symbol | glyS |
ID | 8135165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4703196 |
End bp | 4705265 |
Gene Length | 2070 bp |
Protein Length | 689 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644867484 |
Product | glycyl-tRNA synthetase subunit beta |
Protein accession | YP_003019717 |
Protein GI | 253690527 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGACA AGACTTTTCT GGTGGAAATT GGCACGGAAG AGCTGCCGCC GAAGGCTCTC CGTAATCTGG CAGAATCCTT TGCCGCTAAT TTCACGGCGG AGCTGGATGC CGCCAATCTG GCGCACGGTG AGGTGAGCTG GTTTGCTGCG CCGCGCCGTC TGGCGCTGAA AGTGGCACGC TTAAGCGCTT CTCAGCCCGA TCGTGAAGTA GAAAAACGCG GCCCGGCGAT TGCACAAGCA TTTGATGCTG AAGGGAAAAC CACCAAAGCG GCAGAAGGCT GGGCGCGTGG CTGTGGTATC ACCGTTGAGC AAGCTGAGCG TTTGACGACC GATAAAGGCG AGTGGCTGCT GTATCGCGCC CACGCGAAAG GCGAGCAGGC GCAGGCGCTG CTGGCCGGCA TGATAAGCAC CGCATTATCG AAGCTGCCAA TTCCAAAGCT GATGCGCTGG AGCGACAAAG AAACGCAGTT TGTGCGTCCG GTACATACCG TAACTATGCT GCTGGGTGAC GAATTGATCC CCGGTCAGGT ATTGGGTATC CATTCTGCTC GTACCCTTCG CGGTCACCGC TTTATGGGTG AGGCTGAATT CACGATTGAT AGCGCCGACC AGTATCCGCA GATTCTGCTG GAGCGCGGCA AAGTCGTCGC CGACTACGAT GCGCGTAAAG CGAAAATCAA AGCCGATGCG GAAGAAGCCG CCCGCAAGAT TGGCGGTAAT GCCGATCTGA GCGACAGCCT GCTGGAAGAA GTCACCTCGC TGGTGGAATG GCCAGTGGTA TTGACCGCGA AATTTGAAGA AAAATTCCTC GCTGTGCCGT CCGAAGCGCT GGTTTACACC ATGAAAGGTG ACCAGAAGTA TTTCCCTGTT TACGACAACA GTGGCAATCT GCTGCCGAAC TTCATCTTTG TTGCCAACAT TGAATCCAAA GATCCACAGC AGATTATTTC CGGTAACGAA AAAGTGGTGC GCCCGCGTCT GGCGGATGCT GAATTCTTCT TCAATACTGA CCGCAAAAAG CGTCTGGAAG ATCACCTGCC GCGTCTGGAA ACCGTTTTGT TCCAGCAGCA GTTGGGTACG CTGCGCGACA AAACCGATCG CATTCAGGCG CTGGCGGGCT GGGTAGCTGG TCAGATTGGT GCTGATGTGA ATCACGCGAC GCGTGCGGGT CTGCTGTCCA AGTGTGACCT GATGACCAAC ATGGTGTTTG AATTCACCGA CACGCAGGGC GTGATGGGAA TGCACTATGC GCGCCATGAT GGCGAAGCCG AAGATGTTGC CGTTGCGCTG AATGAGCAAT ATCAGCCGCG CTTTGCGGGT GATGAACTGC CGTCTTCTGC GGTGGCCTGT GCGCTGGCGA TTGCCGACAA GATGGATACG CTGGCAGGGA TTTTTGGCAT TGGCCAACAT CCAAAAGGCG ACAAAGATCC GTTTGCGCTG CGTCGTGCCG CCCTTGGTGT ACTGCGCATC ATCGTCGAAA AACGCCTGCC GCTGGATTTG CAGACGCTGA CCGAAGAAGC GGTGCGTTTG TATGGCGCCA AGCTGACTAA CGCCAACGTT GTGGATGACG TGATTGAGTT TATGCTCGGC CGTTTCCGCG CCTGGTATCA GGAAGAAGGC CACAGCGTAG ATACCATTCA GGCGGTATTG GCGCGTCGTC CAACTCGTCC GGCAGATTTC GATGCCCGCG TGAAAGCCGT CAGCCACTTC CGTTCGCTGG ATGCTGCCGC AGCGCTGGCC GCGGCTAACA AGCGCGTTTC CAACATTCTG GCGAAATCCA CCGATACGCT GAACGAGAGC GTCAACGCTG CCGTATTGAA AGACGCGGCG GAAATTACGC TGGCAACTCA CCTTGTTGTG CTGCGCGATA AACTGACGCC ACTGTTCGCT GAAGGCCGCT ATCAGGAAGC GCTGGTTGAG CTGGCCTCAC TGCGTGAACC TGTCGATGCA TTCTTCGATC AGGTGATGGT CATGGCAGAA GATGAGCAGG TGCGTGTGAA CCGCCTGACG CTGCTGAGCC AACTGCGTGA GCTGTTCTTG CAGGTAGCTG ATATTTCCGT GCTGCAATAA
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Protein sequence | MTDKTFLVEI GTEELPPKAL RNLAESFAAN FTAELDAANL AHGEVSWFAA PRRLALKVAR LSASQPDREV EKRGPAIAQA FDAEGKTTKA AEGWARGCGI TVEQAERLTT DKGEWLLYRA HAKGEQAQAL LAGMISTALS KLPIPKLMRW SDKETQFVRP VHTVTMLLGD ELIPGQVLGI HSARTLRGHR FMGEAEFTID SADQYPQILL ERGKVVADYD ARKAKIKADA EEAARKIGGN ADLSDSLLEE VTSLVEWPVV LTAKFEEKFL AVPSEALVYT MKGDQKYFPV YDNSGNLLPN FIFVANIESK DPQQIISGNE KVVRPRLADA EFFFNTDRKK RLEDHLPRLE TVLFQQQLGT LRDKTDRIQA LAGWVAGQIG ADVNHATRAG LLSKCDLMTN MVFEFTDTQG VMGMHYARHD GEAEDVAVAL NEQYQPRFAG DELPSSAVAC ALAIADKMDT LAGIFGIGQH PKGDKDPFAL RRAALGVLRI IVEKRLPLDL QTLTEEAVRL YGAKLTNANV VDDVIEFMLG RFRAWYQEEG HSVDTIQAVL ARRPTRPADF DARVKAVSHF RSLDAAAALA AANKRVSNIL AKSTDTLNES VNAAVLKDAA EITLATHLVV LRDKLTPLFA EGRYQEALVE LASLREPVDA FFDQVMVMAE DEQVRVNRLT LLSQLRELFL QVADISVLQ
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