| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4165 |
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| Symbol | |
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| ID | 8135163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4699767 |
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| End bp | 4701674 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644867482 |
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| Product | PTS system, mannitol-specific IIC subunit |
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| Protein accession | YP_003019715 |
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| Protein GI | 253690525 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2213] Phosphotransferase system, mannitol-specific IIBC component |
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| TIGRFAM ID | [TIGR00851] PTS system, mannitol-specific IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTCAC CAGATATTAA GATCAAAGTG CAAAACTTTG GTCGCTTCCT CAGCAATATG
GTCATGCCCA ATATTGGCGC TTTTATCGCC TGGGGTATTA TTACCGCTCT GTTTATTCCT
ACCGGCTGGA TTCCCAATGA AACGTTGGCG AAGCTCGTCG GCCCGATGAT TACGTATTTG
CTGCCATTGC TGATTGGTTA TACCGGCGGA CGCCTGGTAT TCGGTGAGCG TGGTGGCGTG
GTCGGTGCAA TTACGACGAT GGGTGTGATC GTCGGGACCG ACATCCCGAT GTTCCTCGGC
GCGATGATCG TTGGTCCATT GGGCGGCTGG GCGATCAAAC GTTTTGACCG CGTGGTCGAC
GGTAAAATCA AGAGCGGCTT TGAAATGCTG GTCAACAACT TCTCTGCCGG TATTATCGGT
ATGTTGTTGG CAATTCTGGC ATTTTTGGCA ATCGGTCCAC TGGTTGAAGT GTTCTCTCAG
GTGCTGGCTT CCGGCGTTAA CCTGATGGTA CAGAACAACC TGCTGCCGTT TACGTCCATC
TTTGTTGAAC CCGCGAAAAT TCTGTTCCTG AATAACGCCA TTAACCACGG TATTTTCTCA
CCGCTGGGCA TTCAGCAGGC GACGGAAACG GGCAAATCTA TTTTCTTCCT GATCGAAGCG
AACCCAGGCC CAGGTATGGG CGTGCTGATG GCTTATATGT TCTTCGGTCG TGGTAACGCG
AAAGAGTCAG CGCCAGGTGC GGCGATTATC CACTTCCTGG GCGGGATTCA CGAAATCTAC
TTCCCTTATG TCCTGATGAA TCCGCGTCTG ATTATCGCGG TGATTCTGGG CGGGATGACC
GGCGTGTTTA CGCTGAGCGT GCTGGGCGGC GGTTTGGTTT CTCCTGCGTC TCCGGGCTCC
ATTCTGGCGG TGCTGGCGAT GACGCCAAAA GGTGCTTACT TCGCTAACCT TGCGGCCATT
GCGGCGGCCT TCGCGGTCTC CTTCATCGTG TCGGCGATTC TGCTGAAAAG CACCAAGCAA
AAAGAAGAAG ACCTGAGCGA TGCAACGCGC CGCGTACAGG AAATGAAAGC GTCTGCGAAA
GGTACGGCGG CGAGCGCTGG CGTCAGCGGC GATATGAGCA CCGTGCGTAA AATCATCGTA
GCCTGTGACG CCGGTATGGG TTCCAGCGCG ATGGGAGCGG GTGTGCTGCG CAAGAAAGTG
CAGGATGCCG GGCTGACCAA CATTTCGGTA ACCAATAGCG CGATCAACAG TCTGCCGGAC
GATGTCGATC TGGTGATTAC GCACCGTGAC CTGACCGAGC GCGCGATGCG TCATGCGCCG
CAGGCACAGC ATATTTCGCT GACCAACTTC CTTGATAGCG GCCTGTATAG CGACCTGGCA
GCGCGTCTGG TGGCTGCGCA GGGTGCCGCG AAACCTGAAA CCGTAGCGAC GCCTGCACCG
GCTGTAGCCG ATACGCAGAC GAACCTGTTC CAACTGGGGG CGGGTAATGT GTTCCTGAAT
CAGCACGCGA CACACAAAGA GCAGGCAATC CGTTTCGCTG GTGAGCAACT GGTGAAAGGT
GGCTACGTCG AGCCTGAGTA CGTTGAAGCG ATGCTGGAGC GTGAAAAGCT GACCTCTACT
TATCTGGGCG AATCGATCGC GGTACCGCAC GGTACGATTG AAGCGAAAGA TCGCGTACTG
AAAACGGGCG TGGTTTTCTG CCAGTACCCT GAAGGGGTTC GCTTTGGCGA TGAAGAAGAT
GAGGTTGCAC GTCTGGTTAT CGGTATCGCT GCCCGTAACA ACGAACACAT TCAGGTCATC
ACCAGCCTGA CCAACGCACT GGATGATGAC GCTGTCATTG AACGTCTGGC GCACACGCAG
GATGTTCAGG AAGTACTCGA CTTACTCTCC GGTAAAAAGA GTGCCTAA
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| Protein sequence | MLSPDIKIKV QNFGRFLSNM VMPNIGAFIA WGIITALFIP TGWIPNETLA KLVGPMITYL
LPLLIGYTGG RLVFGERGGV VGAITTMGVI VGTDIPMFLG AMIVGPLGGW AIKRFDRVVD
GKIKSGFEML VNNFSAGIIG MLLAILAFLA IGPLVEVFSQ VLASGVNLMV QNNLLPFTSI
FVEPAKILFL NNAINHGIFS PLGIQQATET GKSIFFLIEA NPGPGMGVLM AYMFFGRGNA
KESAPGAAII HFLGGIHEIY FPYVLMNPRL IIAVILGGMT GVFTLSVLGG GLVSPASPGS
ILAVLAMTPK GAYFANLAAI AAAFAVSFIV SAILLKSTKQ KEEDLSDATR RVQEMKASAK
GTAASAGVSG DMSTVRKIIV ACDAGMGSSA MGAGVLRKKV QDAGLTNISV TNSAINSLPD
DVDLVITHRD LTERAMRHAP QAQHISLTNF LDSGLYSDLA ARLVAAQGAA KPETVATPAP
AVADTQTNLF QLGAGNVFLN QHATHKEQAI RFAGEQLVKG GYVEPEYVEA MLEREKLTST
YLGESIAVPH GTIEAKDRVL KTGVVFCQYP EGVRFGDEED EVARLVIGIA ARNNEHIQVI
TSLTNALDDD AVIERLAHTQ DVQEVLDLLS GKKSA
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