| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4147 |
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| Symbol | |
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| ID | 8135145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4677926 |
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| End bp | 4678654 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644867464 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003019697 |
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| Protein GI | 253690507 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGCCAT TATTCACAGA TAGCGAAATA ATAAGCAGGG TAATTAAAAA GCATTTCAAC
AAAAACCTGG ATCGCTACGA CGGCATAAAA TTCTCTTTTA TGGTTCTCAA TAAGAAGAAC
CCTTCTCAAA TGATCATCAT TTCCAGTTAT CCCGATGAAT GGGTTAACCT CTATAAAGAA
AACAAATACC AGCATATCGA CCCTGTTGTT CTTGCTTCAT TTAATAAGAT ATCGCCTTTC
TCTTGGGAGA AAAGTCTCGT TATTAACACC CGGTTGCAGC TGGCCAAGAT ATTTGATCTC
TCTAAAAAAT ATAATATTAT TAACGGATAT ACTTTTGTGC TTCACGATCA TGGTGACAAT
TTGGCTATGT TATCGATTAT CGTAGACAGT TCATATCCAG ATAATGTTGA AAAATTCATT
GAAGAGAAGA AAGACACCTT TCAGATGCTG TTAATTGATG CATATGAAAA AATCATCTCT
CTTTGCAGAG AGATGATTGA AAGTAAGAAA CAATTAAATA ATAAAGAAAT GTTCTCTCAA
CGAGAAAATG AAATTCTTTA CTGGGCCAGT ATGGGTAAAA CCTATCTGGA AGTTGCGATT
ATTCTCGGCA TAAAAACCAG TACGGTAAAA TTTCATATCG GCAATGTTGT GAAAAAACTT
GGTGTCCTGA ATGCCAAGCA TGCCATCAGA CTCGGCGTTG AATTACAACT CATTAAGCCT
GTACAATAG
|
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| Protein sequence | MSPLFTDSEI ISRVIKKHFN KNLDRYDGIK FSFMVLNKKN PSQMIIISSY PDEWVNLYKE
NKYQHIDPVV LASFNKISPF SWEKSLVINT RLQLAKIFDL SKKYNIINGY TFVLHDHGDN
LAMLSIIVDS SYPDNVEKFI EEKKDTFQML LIDAYEKIIS LCREMIESKK QLNNKEMFSQ
RENEILYWAS MGKTYLEVAI ILGIKTSTVK FHIGNVVKKL GVLNAKHAIR LGVELQLIKP
VQ
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