Gene PC1_4108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4108 
Symbol 
ID8135106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4641134 
End bp4643005 
Gene Length1872 bp 
Protein Length623 aa 
Translation table11 
GC content59% 
IMG OID644867426 
ProductABC transporter related 
Protein accessionYP_003019659 
Protein GI253690469 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.486076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGATA TCATGCACGC GGGTGCCGCC ACAGCACCCG GTAACGCCCC CAGACCTGTG 
CTGGAAATCG ACGACCTGAG CGTCAGCTTT AGCGGCCGTT CCGGCACGCA TCAGGCGCTA
AAAGGCATTT CCTTTACCGT CAATAAAGGG GAAGTGGTCG CCGTGGTCGG CGAAAGTGGT
TCAGGCAAGT CCGTGACGTC ACTCACCGTG ATGGGACTGC TGGCGGACTC TGCCAATATC
GAACGCGGCG CGCTCCGTTT TACCGCACGC GACGGCCAGC AGCATGACCT GTTGAGCATG
AAAGCGGAAG CACGCCGCAA GCTGCGCGGT CGCGATCTCG CCATGATTTT CCAGGAACCG
ATGACTTCGC TCAATCCGGT GCTGAAAGTC GGCGACCAGC TCACAGAAGC GCTGCTTGAC
CATAAGATCT GTGATGCCGC CAGCGCGGAC AAAAAAGCCC GTGAACTGCT GCACAAGGTC
CGTATCGCGG ATGTCGACCG TGTGATGAAA AGCTACCCGC ACTCGCTGTC CGGCGGGATG
CGCCAGCGCG TGATGATCGC ACAGGCGCTG GCCTGCGACC CACAACTGCT GATTGCCGAT
GAACCGACCA CTGCGCTGGA CGTCACCGTG CAGGCGCGCA TTTTGCAAAT CCTGCGCGAC
CTGCAACAGC AGAGCGACAT GGCAGTGCTG TTTATTACGC ACGATATGGG CGTAGTAGCG
GAAATCGCCG ATCGCGTGGT GGTGATGTAT CGCGGCGAAA TCGTGGAGCA AGGCACCGTC
GAACAGATTT TTGCCGCACC ACAGCACCCG TATACCCAGT CGCTGCTGGC CGCCGTACCC
AAACTGGGCG ACATGCGCGA TAGCCTGTGG CCGAAACGTT TCCCACTGCT AGGGCAGGCT
GCCGACCCGG AGAATATTGA ACAAGTCACC GCCCGCTATG ATGCCGAGCC GCTGTTAGAT
ATTCGCGGGC TGCGGGTTTA TTACCCGATG CGCAGCGGGA TTTTGTCCAC CGTAACTCAC
CACGTTCACG CGGTAGAACA GATCGATTTT AACGTCTGGC CGGGTGAAAC GCTGGCTATC
GTTGGGGAAA GCGGCTGTGG CAAATCCACC ACCGGACGCG CTCTGCTGCG TCTGGTACAG
AGCGAAGCCG AAAGCATCCA TTTTCAGGGC AACGAAATTT CCCAGATGAA AGAGCGTGAT
TTCCAGCCGC TGCGTCGGGA AATGCAGATG GTGTTTCAAG ACCCGTATGC CTCACTCAAC
CCGCGCCTGA CGGTCGGCTT TACCATCGCC GAACCGCTGC TGCTCCACGG ATTGGTGAAA
TCACTGGAAG AAGCGACACC ACAGGTGCAG GCGCTGCTAA AAAGCGTCGG CTTGCTGCCT
GAGCACGCGC GCCGTTATCC GCACGAGTTT TCCGGCGGGC AGCGTCAGCG TATCGCGATT
GCTCGCGCGA TGGCGCTACA GCCGCAGGTC ATCATTGCTG ACGAAGCCGT TTCAGCGCTG
GATGTGTCGA TTCAGGCACA AGTCGTCAAC CTGATGATGG ATCTCCAGAA GAAAACCGGC
GTGTCGTGGA TTTTCATCTC GCACGATATG GCCGTTGTTG AGCGCATCGC CAACCGCGTC
GCGGTGATGT ACCTCGGCCA GATTGTGGAG ATCGGCCCGC GCCAGTCGGT GTTTAACGAT
CCGCAGCATC CGTATACCCG CCGCCTGTTG GCCTCAGTTC CGATTGCCGA TCCAACGCGT
CGCGGTACAC GCCAGTTTGA CGACAGCGAA ATCCCCTCTC CTTTGCGTAA AGCAGGTGAG
ACCGTCGCCA AAACGCGCTA CCGAGAGGTC GCGCCGCAGC ACTGGGTCGC CGACAACGAA
TCGGCAGCCT GA
 
Protein sequence
MTDIMHAGAA TAPGNAPRPV LEIDDLSVSF SGRSGTHQAL KGISFTVNKG EVVAVVGESG 
SGKSVTSLTV MGLLADSANI ERGALRFTAR DGQQHDLLSM KAEARRKLRG RDLAMIFQEP
MTSLNPVLKV GDQLTEALLD HKICDAASAD KKARELLHKV RIADVDRVMK SYPHSLSGGM
RQRVMIAQAL ACDPQLLIAD EPTTALDVTV QARILQILRD LQQQSDMAVL FITHDMGVVA
EIADRVVVMY RGEIVEQGTV EQIFAAPQHP YTQSLLAAVP KLGDMRDSLW PKRFPLLGQA
ADPENIEQVT ARYDAEPLLD IRGLRVYYPM RSGILSTVTH HVHAVEQIDF NVWPGETLAI
VGESGCGKST TGRALLRLVQ SEAESIHFQG NEISQMKERD FQPLRREMQM VFQDPYASLN
PRLTVGFTIA EPLLLHGLVK SLEEATPQVQ ALLKSVGLLP EHARRYPHEF SGGQRQRIAI
ARAMALQPQV IIADEAVSAL DVSIQAQVVN LMMDLQKKTG VSWIFISHDM AVVERIANRV
AVMYLGQIVE IGPRQSVFND PQHPYTRRLL ASVPIADPTR RGTRQFDDSE IPSPLRKAGE
TVAKTRYREV APQHWVADNE SAA