Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_4086 |
Symbol | tdh |
ID | 8135084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4621428 |
End bp | 4622459 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644867404 |
Product | L-threonine 3-dehydrogenase |
Protein accession | YP_003019637 |
Protein GI | 253690447 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
TIGRFAM ID | [TIGR00692] L-threonine 3-dehydrogenase [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCAT TGGCAAAATT GCGGCCGGAA GAGGGCATCT GGATGGTGGA CTCCCCCACG CCGGAGCTCG GGCATAACGA CATCATGATT AAAATTCGCA AAAGCGCGAT TTGCGGAACG GATGTGCATA TCTATAACTG GGACGAATGG TCGCAGAAGA CCATTCCCGT TCCGATGGTT GTCGGGCATG AATACGTGGG AGAAATTGTC GCTATCGGTC AGGAGGTTAA CGGTTTTCAT ATTGGCGATC GGGTCTCTGG CGAAGGACAT ATTACCTGCG GTTACTGCCG TAACTGCCGC GCCGGCCGAC GCCATTTATG CCGCAATGCT ATCGGCGTCG GGGTAAATCG CCCCGGTTCA TTCGCGGAGT ATCTGGTGAT TCCTGCCTAC AACGCGTTTC GTATCCCTGA CAATATTTCT GACGAGCTAG CCGCCATTTT CGATCCTTTC GGTAACGCGG TGCACACTGC GCTTTCTTTT GATTTAGTGG GTGAGGATGT CTTGATTGCT GGCGCAGGGC CGATAGGCAT GATGGCGGCG GCGGTATGTC GTCACGTTGG CGCAAGAAAC GTCGTGATTA CCGATGTGAA TGCGTACCGT CTGGATCTTG CCAGGAAAAT GGGGGCAACG CGTGCCGTCA ATGTGGCAGA GGAGAGGCTG GCTGACGTCA TGATAGAACT GGGCATGACC GAAGGGTTTG ATATTGGGTT AGAGATGTCG GGTGCGCCAT CGGCTTTTCG CGCCATGCTG AAAGCGATGA ACCACGGTGG GCGCATCGCT ATGCTGGGTA TTCCGCACGA ACCGATGTCG ATTGACTGGG GAGAGGTGAT TTTTAAGGGG CTGTTTATCA AAGGTATCTA CGGACGGGAA ATGTTCGAAA CCTGGTACAA AATGTCGGCG CTGATTCAGT CTGGGCTGGA TTTGTCACCG ATTATCACCC ACCGCTTTCA CATTGATGAG TTCCAAAAAG GCTTTGATGC CATGCGCTCG GGTCAATCGG GCAAGGTTAT TCTCAATTGG GACGAGAGAT AA
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Protein sequence | MKALAKLRPE EGIWMVDSPT PELGHNDIMI KIRKSAICGT DVHIYNWDEW SQKTIPVPMV VGHEYVGEIV AIGQEVNGFH IGDRVSGEGH ITCGYCRNCR AGRRHLCRNA IGVGVNRPGS FAEYLVIPAY NAFRIPDNIS DELAAIFDPF GNAVHTALSF DLVGEDVLIA GAGPIGMMAA AVCRHVGARN VVITDVNAYR LDLARKMGAT RAVNVAEERL ADVMIELGMT EGFDIGLEMS GAPSAFRAML KAMNHGGRIA MLGIPHEPMS IDWGEVIFKG LFIKGIYGRE MFETWYKMSA LIQSGLDLSP IITHRFHIDE FQKGFDAMRS GQSGKVILNW DER
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