Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_4081 |
Symbol | gpsA |
ID | 8135079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4616630 |
End bp | 4617649 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644867399 |
Product | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase |
Protein accession | YP_003019632 |
Protein GI | 253690442 |
COG category | [C] Energy production and conversion |
COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCGT CTGACGCTTC CATGACCGTC ATCGGTGCCG GTTCATACGG CACCGCTCTG GCCATTACGC TAGCGCGTAA TGGCCATCGA GTCGTGCTTT GGGGCCACAA CCCTGCACAC ATTCAGGCAT TACAGGCCGC TCGCTGTAAT CAGGCATTCC TGCCGGATGT CCCTTTCCCC GATTCACTAC AGTTGGAAAC CAATCTGGGG CAGGCGCTTG CTGCCAGCAG AAACGTGCTG GTTGTTGTGC CGAGCCATGT GTTTGGTGAT GTTCTGCGTC AGTTGAAACC GCATTTGCGT GCCGATGCGC GTATCGTGTG GGCGACGAAA GGGCTGGAAG CGGAAACGGG ACGGTTGTTG CAGGATGTCG CTCGCGAAGC GCTGGGCGAA ACCATTCCGC TTGCGGTGGT ATCCGGCCCG ACATTCGCCA AAGAATTAGC AGCTGGCATG CCGACGGCTA TTGCTCTGGC ATCGACGGAC CGTGAATTTG CTGACGATCT GCAACGTCTA CTGCACTGTG GAAAGAGCTT CCGCGTATAC AGCAACCCAG ATTTTATCGG TGTGCAGCTG GGCGGGGCGG TGAAGAACGT CATTGCTATC GGTGCCGGGA TGTCTGACGG CATTGGGTTT GGCGCAAATG CACGTACCGC ATTGATCACC CGTGGGCTGG CTGAAATGAC TCGGCTTGGT ACGGCGCTGG GGGCGGATCC CACCACCTTC ATGGGGATGG CTGGGCTGGG CGATCTGGTG CTGACCTGTA CTGATAATCA GTCCCGTAAC CGGCGCTTTG GTATGATGCT GGGGCAGGGA ATGGATGTGC AGAGCGCGCA GGATAGCATT GGTCAGGTTG TTGAAGGGTA TCGCAATACG AAAGAGGTTC TGGCATTAGC GCAACGCTAC GGTGTTGAAA TGCCAATTAC TGAACAACTC TGGCAAGTTC TTTATTGCGG AAAAGACGCC CGAGAGGCGG CACTGAGCCT GTTGGGGCGC ACGCGTAAAG ACGAAACCGC CAAATTATAA
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Protein sequence | MNASDASMTV IGAGSYGTAL AITLARNGHR VVLWGHNPAH IQALQAARCN QAFLPDVPFP DSLQLETNLG QALAASRNVL VVVPSHVFGD VLRQLKPHLR ADARIVWATK GLEAETGRLL QDVAREALGE TIPLAVVSGP TFAKELAAGM PTAIALASTD REFADDLQRL LHCGKSFRVY SNPDFIGVQL GGAVKNVIAI GAGMSDGIGF GANARTALIT RGLAEMTRLG TALGADPTTF MGMAGLGDLV LTCTDNQSRN RRFGMMLGQG MDVQSAQDSI GQVVEGYRNT KEVLALAQRY GVEMPITEQL WQVLYCGKDA REAALSLLGR TRKDETAKL
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