Gene PC1_4020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4020 
Symbol 
ID8135011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp4541095 
End bp4541721 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content52% 
IMG OID644867331 
ProductNADP oxidoreductase coenzyme F420-dependent 
Protein accessionYP_003019571 
Protein GI253690381 
COG category[R] General function prediction only 
COG ID[COG2085] Predicted dinucleotide-binding enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATCG GCATTATTGG TGCAGGCTTT GTTGGACGGG CGATAGCTAA ATTAGCGCTC 
CAGAACGGTC ATCAGGTCAT GCTCAGTAAC TCACGCGACC CCCAATCACT TTTCAGCCTC 
CGCCCGATGA TCGGCTGCGA CATCGGAACC GCCACTCAGG CCGCGCTATT TGGTGACATT 
GTGGTTATCG CCGTTCCCTT TACCGCCATC GATAAACTCC CTGAACAGGC TTTACGGGGA 
AAATCCGTCA TCGATACCGT CAATTACTAT ACCGAGCGAG ATGGTAAGGT CACCGCACTT 
GATACGCGCA GCACCACGAC CAGCGAGCTA CTGGCGCGTT ATTTACCAGA CGCCAGGATC 
ACCAAAGCGT TCAATGCCAT CCCTATGACG CAGCTTGAAA GCGATGGGCT CCCGACCGGC 
TCAGCCAATC GCCGCGCGCT ACCGCTTGCA GGTGATGATG AGCAGGAAAA AGCTATTGTG 
GCTGAACTCT ATGATGCATT CGGATTTGAT GTGGTCGATG CGGGAAAATT GTCTGAAGGA 
TGGCGCTTTG AAAGAGGTAT GCCGTCTTAC TGTATTCGTA TGACAAAAGC AGAATTAACC 
ACTGCGCTGA CGCTTGCCTC ACGCTAA
 
Protein sequence
MNIGIIGAGF VGRAIAKLAL QNGHQVMLSN SRDPQSLFSL RPMIGCDIGT ATQAALFGDI 
VVIAVPFTAI DKLPEQALRG KSVIDTVNYY TERDGKVTAL DTRSTTTSEL LARYLPDARI 
TKAFNAIPMT QLESDGLPTG SANRRALPLA GDDEQEKAIV AELYDAFGFD VVDAGKLSEG 
WRFERGMPSY CIRMTKAELT TALTLASR