Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3984 |
Symbol | |
ID | 8134971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4495698 |
End bp | 4496348 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644867291 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003019535 |
Protein GI | 253690345 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTTAA CACTTAACGA CAAAGCACGG GAACTGTCGC CATTCGAGGT ACTGATTAAC GCGATAGAGA AAGGTGAGCT GCTGCCTGGT GAACGTTTGC AGGAAACACG GTTAGCGAAG CAGTTTGGAT TGAGCCGGAC GCCGATTCGT GAGGCGCTGC ACCGTCTGGA AGCGTTGGGG CTGGTGGAGC CGGGTCCACA GCGTGGACTG ATGATCGCGC AGATCAGCTA TGAGCGACTG CGTCAGCTTT TCGCCGTGCG TGAAGGGTTA GAGCGGCTGG CGATGGAGCT TGCTGTCGCT TCTGCGTCGG CAGAGGAGTT GGCGCTGCTG CAGGATATGG TCGACGTGGA GAAGACGCTC ACCGATAGCC GACAACTGCA CGATCATAAT CGGCTTTTTC ATCGCCAGAT TTACCGGGCG ACTCATAATC CGTATCTGAA TGAGATGCTG GAAAATCTGC GCATTCATCT GTCGCTCCTG CGCGGAACCA CTTATGAATC GACGGAACGT ACCGAAGAGG CGCGGCGTGA ACATCAGGCA ATTGTGGCAG CGTTGGTACG GCGTGATAAG GACGCGGCAC AAGAGGCTGC CTGCCAACAT ATCCGTAACG GCTATCGTGC CCGACTAAGC ATGTTAAATC AGCTGCTTTG A
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Protein sequence | MNLTLNDKAR ELSPFEVLIN AIEKGELLPG ERLQETRLAK QFGLSRTPIR EALHRLEALG LVEPGPQRGL MIAQISYERL RQLFAVREGL ERLAMELAVA SASAEELALL QDMVDVEKTL TDSRQLHDHN RLFHRQIYRA THNPYLNEML ENLRIHLSLL RGTTYESTER TEEARREHQA IVAALVRRDK DAAQEAACQH IRNGYRARLS MLNQLL
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