Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3982 |
Symbol | |
ID | 8134969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 4492789 |
End bp | 4493913 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644867289 |
Product | putative uroporphyrinogen III C-methyltransferase |
Protein accession | YP_003019533 |
Protein GI | 253690343 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2959] Uncharacterized enzyme of heme biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0294425 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGAAC ACAATACCCC CACAGCTCCA TCCGACGAGG TTGCTGAACG GGTTGAACCC GCGCATCAGC AGCAAGATCC CGCACCGCAA CCCAAACGCA GTGGTGCCGT GCTGGGAGCG ATTGCCATTG TGATTGCGCT GGCGATAGGC GCGGGGCTGT ATTACCACGG ACACCAGCAG GCGCAGCGGG AAACCGCCAC GCTTCAACGT CTGGAAGCAC AGTTAAATGC CTTGCAGCAG CAGCACAAGC AAGAACAACA GCAGTGGCAG GACGCTCAGC AGCAGCAAAG CAAAGCGCAG GACACGGCTG CACAGCGTCT TGAGGCGTTA ACGCGTCAGT CAGATGAACT GCGCGATAAG CTGGCGGCAC TTTCCAGCCA TGACACCAAT ACCTGGCTGA TCGCTCAGGC GGATTTTCTG GTGAAACTGG CAGGGCGTAA GCTGTGGAGC GACAAAGACG TCACCACTGC CGGTGCGTTG CTGAAAAGCG CGGACGCAAG TCTGGCGGAA ATGAACGATC CCAGCCTGAT TGAAATCCGC CGCGCATTGA CCAGCGACAT CGGCGCGCTG GCAGGCGTGA GCCAGGTCGA TTTCGACGGC ATCATCCTGA AAGTGAATCA GCTAACCGAC CAGTTGGATA ACTTGCAGCT CGCCGATAAC AACACCGATG AAGCGCCGAT GGACGCCAAC AGCACAGAGC TGTCCGCCTC CTTGAGCGAA TGGCGACAGA ATCTAAGCAA GAGCTGGCAC AATTTCATGG CGGATTTTAT CACCATTCGT CGCCGCGACA GCGCTGCCGA ACCGCTGCTG GCACCGAATC AGGATGTATA TCTGCGTGAG AATATCCGTT CACGTCTGCT GGTTGCCGCG CAGGCCATTC CTCGTCACCA GAATGAAGTG TACAAACAGT CGCTGGAAAC AGCCGCTACC TGGGTTCGCG CCTACTTCGA TACTACCGAC CCCACGACAC AGGCCTTTTT GGATCAGCTC GATGCCTTAA GCCAGCAGTC GGTTTCACTG GATGTCCCAA TGGAGCTACA AAGTCAGGCG CTGTTGGAAA AGCTGATGCA AACGCGCGTT CGTAATCTGC TGGCTCAAGC GCCAGCCACG CAGCAGGGGG AATGA
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Protein sequence | MTEHNTPTAP SDEVAERVEP AHQQQDPAPQ PKRSGAVLGA IAIVIALAIG AGLYYHGHQQ AQRETATLQR LEAQLNALQQ QHKQEQQQWQ DAQQQQSKAQ DTAAQRLEAL TRQSDELRDK LAALSSHDTN TWLIAQADFL VKLAGRKLWS DKDVTTAGAL LKSADASLAE MNDPSLIEIR RALTSDIGAL AGVSQVDFDG IILKVNQLTD QLDNLQLADN NTDEAPMDAN STELSASLSE WRQNLSKSWH NFMADFITIR RRDSAAEPLL APNQDVYLRE NIRSRLLVAA QAIPRHQNEV YKQSLETAAT WVRAYFDTTD PTTQAFLDQL DALSQQSVSL DVPMELQSQA LLEKLMQTRV RNLLAQAPAT QQGE
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