Gene PC1_3982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3982 
Symbol 
ID8134969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4492789 
End bp4493913 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content57% 
IMG OID644867289 
Productputative uroporphyrinogen III C-methyltransferase 
Protein accessionYP_003019533 
Protein GI253690343 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2959] Uncharacterized enzyme of heme biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0294425 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGAAC ACAATACCCC CACAGCTCCA TCCGACGAGG TTGCTGAACG GGTTGAACCC 
GCGCATCAGC AGCAAGATCC CGCACCGCAA CCCAAACGCA GTGGTGCCGT GCTGGGAGCG
ATTGCCATTG TGATTGCGCT GGCGATAGGC GCGGGGCTGT ATTACCACGG ACACCAGCAG
GCGCAGCGGG AAACCGCCAC GCTTCAACGT CTGGAAGCAC AGTTAAATGC CTTGCAGCAG
CAGCACAAGC AAGAACAACA GCAGTGGCAG GACGCTCAGC AGCAGCAAAG CAAAGCGCAG
GACACGGCTG CACAGCGTCT TGAGGCGTTA ACGCGTCAGT CAGATGAACT GCGCGATAAG
CTGGCGGCAC TTTCCAGCCA TGACACCAAT ACCTGGCTGA TCGCTCAGGC GGATTTTCTG
GTGAAACTGG CAGGGCGTAA GCTGTGGAGC GACAAAGACG TCACCACTGC CGGTGCGTTG
CTGAAAAGCG CGGACGCAAG TCTGGCGGAA ATGAACGATC CCAGCCTGAT TGAAATCCGC
CGCGCATTGA CCAGCGACAT CGGCGCGCTG GCAGGCGTGA GCCAGGTCGA TTTCGACGGC
ATCATCCTGA AAGTGAATCA GCTAACCGAC CAGTTGGATA ACTTGCAGCT CGCCGATAAC
AACACCGATG AAGCGCCGAT GGACGCCAAC AGCACAGAGC TGTCCGCCTC CTTGAGCGAA
TGGCGACAGA ATCTAAGCAA GAGCTGGCAC AATTTCATGG CGGATTTTAT CACCATTCGT
CGCCGCGACA GCGCTGCCGA ACCGCTGCTG GCACCGAATC AGGATGTATA TCTGCGTGAG
AATATCCGTT CACGTCTGCT GGTTGCCGCG CAGGCCATTC CTCGTCACCA GAATGAAGTG
TACAAACAGT CGCTGGAAAC AGCCGCTACC TGGGTTCGCG CCTACTTCGA TACTACCGAC
CCCACGACAC AGGCCTTTTT GGATCAGCTC GATGCCTTAA GCCAGCAGTC GGTTTCACTG
GATGTCCCAA TGGAGCTACA AAGTCAGGCG CTGTTGGAAA AGCTGATGCA AACGCGCGTT
CGTAATCTGC TGGCTCAAGC GCCAGCCACG CAGCAGGGGG AATGA
 
Protein sequence
MTEHNTPTAP SDEVAERVEP AHQQQDPAPQ PKRSGAVLGA IAIVIALAIG AGLYYHGHQQ 
AQRETATLQR LEAQLNALQQ QHKQEQQQWQ DAQQQQSKAQ DTAAQRLEAL TRQSDELRDK
LAALSSHDTN TWLIAQADFL VKLAGRKLWS DKDVTTAGAL LKSADASLAE MNDPSLIEIR
RALTSDIGAL AGVSQVDFDG IILKVNQLTD QLDNLQLADN NTDEAPMDAN STELSASLSE
WRQNLSKSWH NFMADFITIR RRDSAAEPLL APNQDVYLRE NIRSRLLVAA QAIPRHQNEV
YKQSLETAAT WVRAYFDTTD PTTQAFLDQL DALSQQSVSL DVPMELQSQA LLEKLMQTRV
RNLLAQAPAT QQGE