Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3980 |
Symbol | hemC |
ID | 8134967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 4491087 |
End bp | 4492028 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644867287 |
Product | porphobilinogen deaminase |
Protein accession | YP_003019531 |
Protein GI | 253690341 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000129404 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGCCA ATATTATTAG AATTGCCACC CGACAAAGCC CGCTCGCCCT GTGGCAAGCA CGATATGTTC AGCAGTGTCT GAATCACCTC TACCCGGATT TACACGTGGA GCTGGTGCCG ATGGTGACCC GCGGCGACAT TATCCTGGAT ACGCCACTGG CAAAGGTCGG CGGTAAGGGA TTGTTTGTTA AAGAGCTGGA ATTGGCGCTG CTTGAAGGGC GCGCTGATAT TGCCGTCCAT TCCATGAAAG ATGTGCCCGT CGAATTCCCG GATGGCCTCG GCCTGACTAC CATTTGCGAA CGCGATGACC CGCGCGACGC ATTCGTTTCC AACCGTTACG ACAGCCTCGA ACAATTACCG GAAGGCAGCT GTGTCGGCAC ATCCAGCCTG CGTCGCCAGT GTCAGCTGCG CGCCCGACGC CCTGATCTAG TGATTCGTGA TTTGCGCGGC AATGTCGGAA CGCGTCTGGC AAAACTGGAC AACGGCGAGT ATGACGCCAT TATCCTTGCC GTCGCGGGTT TGAAACGCCT CGGCCTTGAA GAACGCATCC GCTGTGCGCT GAGCCCGGAA GAATCTCTAC CTGCCGTCGG ACAAGGTGCT ATCGGCATCG AATGCCGTTT AAATGACGAT CGTATTCGCC AACTCCTTGC CCCACTCAAT CACCCCGCGA CCGCTGCCCG CGTCCAGGCT GAACGCGCCA TGAATGTGCG CCTTGAAGGT GGCTGTCAGG TGCCGATTGG CAGCTATGCC GAACTGGAAG GCGATACACT GTGGTTACGT GCGCTGGTTG GCGCCCCGGA CGGTAGCCAA ATGATCGTCG GTGAACGTAG AGGAAACGTC TCCGACGCCG AACAGATCGG CATCGCACTG GCGGAAGAGC TGTTAGCAAA AGGGGCCAGC GCCATCCTTC AGGCCGTTTA TCACGAGTCG AGCTCATCAT GA
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Protein sequence | MLANIIRIAT RQSPLALWQA RYVQQCLNHL YPDLHVELVP MVTRGDIILD TPLAKVGGKG LFVKELELAL LEGRADIAVH SMKDVPVEFP DGLGLTTICE RDDPRDAFVS NRYDSLEQLP EGSCVGTSSL RRQCQLRARR PDLVIRDLRG NVGTRLAKLD NGEYDAIILA VAGLKRLGLE ERIRCALSPE ESLPAVGQGA IGIECRLNDD RIRQLLAPLN HPATAARVQA ERAMNVRLEG GCQVPIGSYA ELEGDTLWLR ALVGAPDGSQ MIVGERRGNV SDAEQIGIAL AEELLAKGAS AILQAVYHES SSS
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