| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3971 |
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| Symbol | uvrD |
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| ID | 8134958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4481434 |
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| End bp | 4483596 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644867278 |
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| Product | DNA-dependent helicase II |
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| Protein accession | YP_003019522 |
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| Protein GI | 253690332 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGTTT CTGATCTGCT CGATGGCCTC AACGACAAAC AGCGTGACGC GGTAGCCGCG
CCGCGCAGCA ATTTATTGGT GCTGGCGGGG GCAGGCAGCG GCAAAACGCG GGTACTGGTT
CATCGTATTG CCTGGCTCTT GTCCGTAGAA AACTGTTCGC CGTACTCCAT CATGGCGGTG
ACGTTTACCA ACAAAGCGGC GGCGGAGATG CGCCATCGTA TCGATCACCT GATCGGCACC
AGTCAGGGCG GTATGTGGAT TGGCACTTTT CACGGGCTGG CACACCGTCT GCTGCGTGCG
CACCATATGG ATGCCAATCT GCCGCAGGAT TTCCAGATTC TGGACAGCGA AGATCAACTG
CGTCTGCTGA AGCGTCTGAT TCGGGCGCTG AATCTGGACG AGAAACAGTG GCCGCCGCGT
CAGGCGATGT GGTTTATCAA CGGAAAGAAA GATGAGGGGC TACGTCCGCA GCATATTGAA
AGCTACGGCA ACCCTATCGA GCAAACGTGG CAGCGCGTGT ATCAGGCCTA TCAGGAAGCG
TGCGATCGTG CCGGGCTGGT GGATTTCGCC GAATTGCTGC TGCGTGCGCA CGAACTGTGG
TTGAACAAGC CGCATGTGCT GAACCACTAT CGCGAACGTT TCACCAATAT TCTGGTGGAC
GAATTTCAGG ATACCAACCG CATTCAATAT GCCTGGATCC GTATGCTGGC GGGCGACAGC
GCCAAAGTGA TGATCGTCGG GGATGACGAT CAGTCGATTT ACGGCTGGCG CGGCGCGCAG
GTCGAGAATA TTCAGCTGTT CCTGAAAGAT TTCGCTGGCG CAGAAACGAT CCGTCTGGAG
CAGAACTACC GCTCGACCAG CAACATCCTG AAAGCGGCGA ATGCGCTGAT CGCACATAAC
GGTGGGCGAC TCGGAAAAAA CCTGTGGACC GATGGCGTAG AGGGCGAGCC TATTTCGCTG
TATTGCGCGT TCAACGAATT GGATGAAGCG CGCTACGTCG TCAACCGGAT TAAAACCTGG
CAGGAAAATG GCGGTGCACT GAAAGATAAC GCCATTCTGT ATCGGAGCAA CGCCCAGTCG
CGCGTGCTGG AAGAGGCGCT GTTGCAGCAG AGTATGCCGT ACCGCATTTA CGGCGGCATG
CGCTTCTTTG AGCGTCAGGA AATTAAAGAC GCGCTGTCTT ATCTGCGCCT CATCGCCAAT
CGTAACGACG ATGCGGCGTT CGAGCGCGTG GTGAATACGC CGACGCGCGG CATCGGCGAT
CGCACATTGG ATGTCGTGCG CCAGACGTCG CGCGATCGTC AGTTGACGCT GTGGCAAGCC
ACACGGGCGC TGTTGCAGGA GAAAGTGCTG GCGGGACGCG CGGCGGCATC GCTACAGCGC
TTTATTGAAT TGATCGATGC GCTGGCCTAT GAAACGTCGG AACTGCCGCT GCATGTGCAA
ACCGACCGGG TCATTAAAGA TTCCGGCCTG TGGAGCATGT ACGAACAGGA AAAAGGCGAA
AAAGGGCAGG CGCGGGTAGA AAACCTCGAG GAACTGGTGA CGGCGACGCG CCAGTTCAGC
TATCAGGAAG AAGATCAGGA TCTGATGCCG CTTCAGGCTT TCCTGTCGCA TGCCGCGCTG
GAAGCGGGGG AAGGTCAGGC GGATGCCAAT CAGGATGCGG TACAGCTCAT GACGCTGCAC
TCGGCGAAAG GGCTGGAGTT CCCGCAGGTG TTTATCGTCG GCATGGAAGA AGGCATGTTC
CCCAGCCAGA TGTCGCTGGA TGAAGGTGGG CGTTTGGAAG AAGAACGTCG TCTGGCCTAT
GTCGGCGTGA CGCGTGCGAT GGAAAAGCTG ACGATAACCT ACGCCGAATC CCGCCGTTTA
TACGGCAAAG AAGCTTATCA CCGACCGTCA CGATTCGTCG GTGAACTGCC TGAAGAGTGT
GTTGAGGAAG TGCGGTTACG CGCCAGCGTC TCCCGTCCGG TCAATCACCA GCGTCTTGGT
ACGCCGATCA CGCAAAACGA CAGTGGCTAT AAATTGGGGC AGCGGGTGCG CCATGCGAAA
TTTGGTGAAG GCACGATCGT GAATCTGGAA GGCAGCGGCG ATCACGCCCG GCTTCAGGTC
GCGTTTCAAG GACAGGGCAT TAAATGGCTG GTTGCCGCCT ATGCCCGGTT GGAAACGGTG
TGA
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| Protein sequence | MDVSDLLDGL NDKQRDAVAA PRSNLLVLAG AGSGKTRVLV HRIAWLLSVE NCSPYSIMAV
TFTNKAAAEM RHRIDHLIGT SQGGMWIGTF HGLAHRLLRA HHMDANLPQD FQILDSEDQL
RLLKRLIRAL NLDEKQWPPR QAMWFINGKK DEGLRPQHIE SYGNPIEQTW QRVYQAYQEA
CDRAGLVDFA ELLLRAHELW LNKPHVLNHY RERFTNILVD EFQDTNRIQY AWIRMLAGDS
AKVMIVGDDD QSIYGWRGAQ VENIQLFLKD FAGAETIRLE QNYRSTSNIL KAANALIAHN
GGRLGKNLWT DGVEGEPISL YCAFNELDEA RYVVNRIKTW QENGGALKDN AILYRSNAQS
RVLEEALLQQ SMPYRIYGGM RFFERQEIKD ALSYLRLIAN RNDDAAFERV VNTPTRGIGD
RTLDVVRQTS RDRQLTLWQA TRALLQEKVL AGRAAASLQR FIELIDALAY ETSELPLHVQ
TDRVIKDSGL WSMYEQEKGE KGQARVENLE ELVTATRQFS YQEEDQDLMP LQAFLSHAAL
EAGEGQADAN QDAVQLMTLH SAKGLEFPQV FIVGMEEGMF PSQMSLDEGG RLEEERRLAY
VGVTRAMEKL TITYAESRRL YGKEAYHRPS RFVGELPEEC VEEVRLRASV SRPVNHQRLG
TPITQNDSGY KLGQRVRHAK FGEGTIVNLE GSGDHARLQV AFQGQGIKWL VAAYARLETV
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