Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3965 |
Symbol | |
ID | 8134952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4475270 |
End bp | 4476142 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644867272 |
Product | phospholipase A |
Protein accession | YP_003019516 |
Protein GI | 253690326 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2829] Outer membrane phospholipase A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.91996 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATAAAA TAGTACTCGT ACTGGCAGCA TTACTGATGG CACAGGCTCA TGCTGAAACA ACAACAAACG TAAACGCGCC TGCGCCAAAT CAACCGGTGG TACGTGGCAG CATTATTGCC AGTCTGTTAC AAGAGCACGA TACCCCGTTT GTCCTCTATC CTTATGAAAG TAACTACTTG CTGTACACCT ATACCAGCAA CATCAATAAA ACGGCGATCC AGAGCTATAA CTGGGGCGAT GAAGCACGTA AAGATGAAGT GCATTACCAG TTGAGCCTGG GATTCCCGAT CTGGCGTGGC ATTCTGGGTG ATAACTCGCT GCTGGGGGCT TCCTATACGC AGCGCTCATG GTGGCAACTG TCGAATAAGA GCGAGTCTTC TCCATTCCGT GAAACGGATT ATGAACCTCA GGTCTTTTTG GGCTGGGCAA CGAACGCCAC CCTCGCGGGC TGGACGCTGC GGGATGTGGA AGTGGGCTTT AATCACCAAT CTAACGGCCG TTCCGAACCC ACTTCACGCA GTTGGAACCG CGCCTATGCC CGTCTGATGG CACAAAACGG TAATTGGCAG GTTGATGTGA AACCGTGGAT TCGTTTCTCT GATAGCCAGG ACGATAACCC GGACATCACC AAATACATGG GGCATTACCG CTTACGCGTT GGCTATGTGT GGGGCGACAG CGTGTTTAGC GCGGAAGGGC GTTATAACTG GAACAGCGGC TACGGCGGTG GTGAACTGGG CTGGAGCTAT CCGCTGACGC GTCATGTTCG CTTTTATACC AAGGTCTTTA GCGGTTACGG TGAATCACTG ATTGATTACA ACCACCGTCA GACTCGCTTC GGCGTTGGGG TGACGCTGAA CGACATGTTC TAA
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Protein sequence | MHKIVLVLAA LLMAQAHAET TTNVNAPAPN QPVVRGSIIA SLLQEHDTPF VLYPYESNYL LYTYTSNINK TAIQSYNWGD EARKDEVHYQ LSLGFPIWRG ILGDNSLLGA SYTQRSWWQL SNKSESSPFR ETDYEPQVFL GWATNATLAG WTLRDVEVGF NHQSNGRSEP TSRSWNRAYA RLMAQNGNWQ VDVKPWIRFS DSQDDNPDIT KYMGHYRLRV GYVWGDSVFS AEGRYNWNSG YGGGELGWSY PLTRHVRFYT KVFSGYGESL IDYNHRQTRF GVGVTLNDMF
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