| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3958 |
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| Symbol | glpT |
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| ID | 8134945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4467343 |
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| End bp | 4468692 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644867265 |
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| Product | sn-glycerol-3-phosphate transporter |
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| Protein accession | YP_003019509 |
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| Protein GI | 253690319 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00712] glycerol-3-phosphate transporter
[TIGR00881] phosphoglycerate transporter family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00220837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAGTA TTTTTAGGCC TGCAGCCCAC CAGGCGCGCG TATCGCAGGA TCGTGTCGAT
CCCCTCTATC GCCGTCTGCG CTGGCAGATA TTCATGGGGA TCTTTTTTGG CTACGCCGCC
TACTATCTGG TACGCAAAAA CTTCACACTG GCAATGCCTT ACCTGATTGA ACAGGGCTTC
TCACGCGGTG ACCTTGGCTT TGCGCTATCC GGTATCTCTA TCGCCTACGG CTTTTCCAAA
TTCATCATGG GTTCGGTATC TGACCGTTCC AACCCACGGG TTTTCCTGCC TGCCGGTCTG
ATTCTGGCAG CCGCCGTGAT GCTGTTCATG GGCTTCGTGC CGTGGGCAAC ATCAAGCATC
GCGATTATGT TCGTCCTGCT GTTCATGTGC GGCTGGTTCC AGGGAATGGG ATGGCCACCG
TGTGGACGCA CCATGGTTCA CTGGTGGTCG CAGAAAGAGC GTGGCGGCAT CGTATCCGTC
TGGAACTGTG CTCACAACGT CGGCGGCGGG CTTCCGCCTC TGCTGTTCCT GATGGGTATG
GCCTGGTTTA ACGACTGGAA AGCCGCACTT TATATGCCGG CCTTCGCCGC GATTCTGGTT
GCTCTGATTG CGTTTGCACT GATGCGTGAC ACACCGCAAT CCTGTGGTTT GCCACCGATT
GAAGAGTACA AAAACGACTA CCCCGTTGAT TACAATGAAA AAGACGAAGA AGAACTGACG
GCTAAGCAGA TTTTCATGCA GTACGTTTTC CCGAACAAAC TGCTGTGGTA CATCGCTATC
GCCAACGTCT TCGTTTACCT GCTGCGTTAC GGCATCCTCG ACTGGTCACC GACTTATCTG
AAAGAAGTGA AACACTTCGC ACTGGATAAA TCCTCCTGGG CCTACTTCCT GTACGAATAC
GCAGGTATTC CGGGTACGCT GCTGTGCGGC TGGATGTCCG ATAAAGTGTT CAAAGGCAAC
CGTGGTGCAA CGGGCGTGTT CTTTATGACG CTGGTGACGA TAGCGACCAT CGTGTACTGG
ATGAACCCAG CCGGTAATCC GGGTGTGGAT ATGGCCTGTA TGATCGTCAT CGGCTTCCTG
ATTTACGGCC CGGTGATGCT GATTGGTCTG CACGCACTGG AGCTGGCACC GAAGAAAGCA
GCAGGTACAG CAGCGGGCTT CACCGGCCTG TTCGGCTACC TCGGTGGCTC CGTTGCCGCT
AGCGCCATCG TCGGCTACAC CGTTGACTTT TTCGGTTGGG ACGGCGGCTT CATGGTGATG
ATCGGCGGCA GCATTCTGGC GGTACTTCTG CTGATTGTTG TTATGCTGAA TGAGAAAAAA
CATAAAGCAG AGTTAGCCAG CCGCGCTTAA
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| Protein sequence | MLSIFRPAAH QARVSQDRVD PLYRRLRWQI FMGIFFGYAA YYLVRKNFTL AMPYLIEQGF
SRGDLGFALS GISIAYGFSK FIMGSVSDRS NPRVFLPAGL ILAAAVMLFM GFVPWATSSI
AIMFVLLFMC GWFQGMGWPP CGRTMVHWWS QKERGGIVSV WNCAHNVGGG LPPLLFLMGM
AWFNDWKAAL YMPAFAAILV ALIAFALMRD TPQSCGLPPI EEYKNDYPVD YNEKDEEELT
AKQIFMQYVF PNKLLWYIAI ANVFVYLLRY GILDWSPTYL KEVKHFALDK SSWAYFLYEY
AGIPGTLLCG WMSDKVFKGN RGATGVFFMT LVTIATIVYW MNPAGNPGVD MACMIVIGFL
IYGPVMLIGL HALELAPKKA AGTAAGFTGL FGYLGGSVAA SAIVGYTVDF FGWDGGFMVM
IGGSILAVLL LIVVMLNEKK HKAELASRA
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