| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3943 |
|---|
| Symbol | |
|---|
| ID | 8134930 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | + |
|---|
| Start bp | 4448254 |
|---|
| End bp | 4448766 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644867250 |
|---|
| Product | carbohydrate kinase, thermoresistant glucokinase family |
|---|
| Protein accession | YP_003019494 |
|---|
| Protein GI | 253690304 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3265] Gluconate kinase |
|---|
| TIGRFAM ID | [TIGR01313] carbohydrate kinase, thermoresistant glucokinase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGGTC GAAGCATTAT TCTGATGGGC GTATCAGGCA GTGGAAAATC CTCAGTTGGC
GCTGAACTTG GCCGCGCCAT TCAGGCAAAA TTTATTGATG GCGACGATCT GCATCCGCGC
GCGAATATCC AGAAAATGGC CAGCGGCACG CCACTGAACG ATGACGACCG TGCACCGTGG
CTGGAGCGGC TTAGCGATGT CGCTTACAGC CTGGCACACA AAAACGAGAC CGGCATCATC
GTCTGTTCCG CGCTGAAAAA GCGTTACCGC GACCGCCTGC GCGAAGGGAA CGAAAAGATG
GTGTTTATCT ATTTGAAAGG CAGCTTTGAG CTGGTGCTCG AGCGTCACAA AGCCAGAGCA
GGCCACTTCA TGCCAACGGA TCTGCTGAAA AGTCAGTTCG ATGCGCTGGA AGAGCCGGGC
AGTGATGAAC CGGATGTCCT GAAGGTCGAT ATTGACGGCA CTCGGGAAGA AGTCGTACAG
CGCTGCGTTG AGGCACTGCG TGCAGCAGGC TAA
|
|---|
| Protein sequence | MSGRSIILMG VSGSGKSSVG AELGRAIQAK FIDGDDLHPR ANIQKMASGT PLNDDDRAPW
LERLSDVAYS LAHKNETGII VCSALKKRYR DRLREGNEKM VFIYLKGSFE LVLERHKARA
GHFMPTDLLK SQFDALEEPG SDEPDVLKVD IDGTREEVVQ RCVEALRAAG
|
|---|
| |