| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3938 |
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| Symbol | |
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| ID | 8134925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4441982 |
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| End bp | 4443700 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644867245 |
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| Product | signal transduction histidine kinase, LytS |
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| Protein accession | YP_003019489 |
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| Protein GI | 253690299 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3275] Putative regulator of cell autolysis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTAGCC AGATTGATCT CATTCTTTCC CTGTTACAGC AGATGTGTGT TTATCTGGTT
ATCGCCTATC TACTCAGCAA GACACCGCTG TTCATCCCGC TAATGCAGGT CACCATTCGC
CTGCCACACA AGCTGGTGTG CTATCTGGTT TTTTCCGTGT TTTGCATTAT GGGAACCTAC
TTCGGCCTGC ATATAGACGA TTCGATTGCC AATACCCGTG CGACCGGTGC CGTGCTCGGG
GGCATGCTGG GCGGCCCTTC CGTTGGCTTT CTCGTCGGGT TAACGGGCGG ATTACACCGC
TATTCAATGG GAGGCATGAC CGCGCTGGCC TGTATGCTGT CGACCATCGC CGAAGGCCTG
CTCGGCGGGT TACTGCATCG CTATCTGGCA CGCCGTAATC GTATCGATCT CCTGTTTCAG
CCCCTCGTCG TCGGGCTGAC CGCACTGGTT GCAGAATGTT TGCAAATGGC GATTATTCTG
CTGGTCGCCC GTCCATTTGA TAACGCCGCA GAGCTGGTGA GGGACATTGC GCTACCGATG
ATGATCACCA ATACCATCGG TTCCGCCATG TTTATGCGCA TCCTGCTCGA CAGACGCGCC
ATTTTTGAAA AATACACCTC TGCATTTTCC GCCAAGGCGC TGCAAATCGC CGCCCGCGCC
GAAGGGGCGC TACGTCAGGG GTTTAATCCA CAAAACAGTA TGCGCGTTGC CCGTATTTTG
TATGAAGAGC TGGGTGTCGG TGCCGTGGCG ATTACCGATC GCGATAAACT GCTGGCCTTC
ATCGGGCTAG GCGACGATCA CCACAATGTC GGCGCGCCCA TTACGTCATC ACACACGCGC
CGGGCGATAG ACAACAATCA GGTGGTGTAC GCCGACGGCA ACGAGGTGTC CTACACCTGT
TCGGTGTCAT CACACTGCAA ACTCGGGTCC ACGCTGGTAA TCCCGCTGCG TGGCGAAGAT
CAGCGCGTTG TCGGCACGAT CAAGCTTTAT GAGCCCAAAA ACAAGCTATT TTCCAGCATT
AACCGTACGC TGGGAGAAGG GATCGCCCAC CTGCTTTCCG CACAGATTCT GACAGGTCGT
TTTGAACAGC AGAAACAGCT GCTGGCGCAA TCGGAAATCA AGCTACTGCA CGCGCAGGTC
AACCCGCATT TTCTGTTCAA CGCGCTGAAT ACGCTGTCCG CCGTGATACG GCGCAACCCG
GATCACGCTC GCCAACTGGT GCTGTCTCTG TCGACGTTTT TCCGTAAAAA CCTCAAGCGC
AGCAACGATG AAGTGTCGCT CAATGACGAG CTGGAGCACG TTAACGCCTA TCTCGAAATC
GAAAAAGCGC GCTTTGCCGA TCACCTGACG GTAGACATTT CGCTGCCGGA GGCGCTGCGT
GAAGCACGAT TACCCGCATT TTCTCTGCAA CCGATTGTCG AAAATGCGAT TAAGCACGGT
ATCTCACAGA TGATTGAAAG TGGGCACATC CACATCAGCG GACGCCTGCA CGCCAACACG
CTGGAACTGT CAGTAGAAGA TAATGCGGGC ACCTATCAGC CCCGCAGCGG TGGCGATGGA
TTAGGCATGA ATTTGGTCGA CCGCCGTATC AAAGCACGCT ACGGCAACCG CTACGGCATC
ACGGTAGTCA GCGAAGCGGA TAAATTCACC CGAGTCGAAG TGCGCGTCCC GCTGATTTCA
GCGCGTAAAG CATTGGAACA GATGGATAGT GTGGCATGA
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| Protein sequence | MVSQIDLILS LLQQMCVYLV IAYLLSKTPL FIPLMQVTIR LPHKLVCYLV FSVFCIMGTY
FGLHIDDSIA NTRATGAVLG GMLGGPSVGF LVGLTGGLHR YSMGGMTALA CMLSTIAEGL
LGGLLHRYLA RRNRIDLLFQ PLVVGLTALV AECLQMAIIL LVARPFDNAA ELVRDIALPM
MITNTIGSAM FMRILLDRRA IFEKYTSAFS AKALQIAARA EGALRQGFNP QNSMRVARIL
YEELGVGAVA ITDRDKLLAF IGLGDDHHNV GAPITSSHTR RAIDNNQVVY ADGNEVSYTC
SVSSHCKLGS TLVIPLRGED QRVVGTIKLY EPKNKLFSSI NRTLGEGIAH LLSAQILTGR
FEQQKQLLAQ SEIKLLHAQV NPHFLFNALN TLSAVIRRNP DHARQLVLSL STFFRKNLKR
SNDEVSLNDE LEHVNAYLEI EKARFADHLT VDISLPEALR EARLPAFSLQ PIVENAIKHG
ISQMIESGHI HISGRLHANT LELSVEDNAG TYQPRSGGDG LGMNLVDRRI KARYGNRYGI
TVVSEADKFT RVEVRVPLIS ARKALEQMDS VA
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