Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3929 |
Symbol | |
ID | 8134916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4428228 |
End bp | 4428986 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644867236 |
Product | DNA-binding transcriptional repressor GlpR |
Protein accession | YP_003019480 |
Protein GI | 253690290 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGCAGA CACAACGGCA TGACGCCATT ATTGAACTGG TGCGTCGGCA GGGGTATGTC AGTACTGAAG AGCTGGTGGA TCATTTTGCG GTGAGTCCGC AAACCATCCG TCGCGATCTG AACGATCTGG CCGAACAGAA TAAGATCCAT CGTCACCACG GCGGCGCGGC CTTGCCGTCC AGTTCAGTGA ACACGGCCTA CCATGACCGT AAAATGATGT GGTCGGACGA AAAAGCGCGC ATTGCCCGTC GGGTGGCGAG CCAGATTCCA GACGGCGCCA CCTTGTTTAT CGATATCGGC ACCACGCCTG AAGCGGTGGC CTATGCGCTG ATGCAGCACA AGGATCTGCG CGTGGTCACC AATAACCTGA ATGTGGCAAC GCTGCTGACG GCAAAAGAGG ATTTTCGTCT GATTTTGGCC GGTGGTGAAG TGCGTACTCG TGATGGCGGC ATCATGGGTG AAGCAACGCT AGATTTTATC TCTCAGTTCC GCCTGGATTT CGGCATTTTG GGCATCAGCG GTATTGACAT GGATGGGTCA TTACTGGAGT TTGATTACCA TGAAGTGCGC ACAAAACGGG CGATTATTGA AAATTCTCGC TGCGTCATGC TGGTGACGGA TCATTCCAAG TTTGGCCGTA ATGCGATGGT GAATTTGGGC AACATGGATT TGATCGACTA TCTTTTTACC GATCAGTCAC CACCGCCCAG CGTACTGAAA ATCATTGAAC AACATAAGGT ACAGTTGGAG TTGTGTTGA
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Protein sequence | MKQTQRHDAI IELVRRQGYV STEELVDHFA VSPQTIRRDL NDLAEQNKIH RHHGGAALPS SSVNTAYHDR KMMWSDEKAR IARRVASQIP DGATLFIDIG TTPEAVAYAL MQHKDLRVVT NNLNVATLLT AKEDFRLILA GGEVRTRDGG IMGEATLDFI SQFRLDFGIL GISGIDMDGS LLEFDYHEVR TKRAIIENSR CVMLVTDHSK FGRNAMVNLG NMDLIDYLFT DQSPPPSVLK IIEQHKVQLE LC
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