| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3927 |
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| Symbol | malQ |
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| ID | 8134914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4423566 |
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| End bp | 4425650 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644867234 |
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| Product | 4-alpha-glucanotransferase |
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| Protein accession | YP_003019478 |
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| Protein GI | 253690288 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1640] 4-alpha-glucanotransferase |
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| TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTCAAGG TGGATAAACT GGCAAGCCAG CAGACAGGCA TCGCGGAAAG CTATACCGAT
GCCTATGGCA AAGAGCACAT TGTTGCGGCC GCAATCAGAA ACCAGATTCA GGCAATGATG
GACGTTTCTG ACAGCGGCAA TGCGCCCTTG CCGCCTGTTC GTGTCTTTTT GCAGGGCCGG
GACGCGGTCA TTGAGCTTGC TGGTCACGGT GAATTCCTTT GGACGCTAAT GTATGAAAAT
GGCGGTCAAA TTCAGGGGCA GATCACGGGC GGCTCTACGT TGGCTCTGCC GGGCGTGCTG
CCGCTGGGTT ACCACTACCT GACGTTGACG CAGGCCGACC AGCGCTGGAG TTGCCGGATT
ATTGTTGCGC CGCACCGCTG CTACGAACCC GAAGCCTTAC AGCAGGGAAA ACGCTGGTGG
GGTGTTACCG TCCAGCTTTA CACCTTGCGT TCGCAGAACA ACTGGGGCGT CGGGGATTTT
GGCGACCTGC GCCATCTGGT GGAACAGATT GCCCGGCGCG GCGGTGCCTT TGTGGGGCTA
AACCCGCTGC ATTCGCTGTA TCCCGCGCTG CCAGAGGCCG CAAGCCCTTA CAGTCCTTCC
TCCCGACACT GGCTGAACAT TATTTATATT GATGTGAATC GCATCGATGA TTTTCAGCAG
AGCGAGGAGG CGCAGGCATG GTGGCTCCGT GAGGATACCC AAAGTGCGGT GACGGCGTTA
CGGGCAGGGC GCTGGGTCGA TTATGAACCG GTAACGGCGC TTAAGCTGAC TGCCTTACGG
TTGGCTTTCC GCTACTTTAC GACACGCAGC ACGCTGGACC CGCGTATCAG TGCCTTTCGC
CAGTTTGTCG TCAGCGGCGG GCAGAGCCTG CAACTTCAGG CGACGTTTGA TGCGTTGCAG
GCCTACCTGA AAAAGCAGGG TGAGAACTAC GCGGACTGGC ACCAATGGCC AGCCCGTTAC
CATGACGTGC ACAGTGAAAC CGTGAAGTCA TTCCGCCGTG AACACAGCGA TGAGATTACG
TTTTACAGTT GGCTGCAATG GGTGGCGCAT GAGCAACTTG CAGAGTGTTA CGCGCACAGT
AAACAGCTTG GCCTGCCGCT CGGTCTGTAT CGCGATTTAG CCGTTGGGGT CGCACAGGGC
GGCGCGGAAA CCTGGGATGA ACGGCAGCTC TATTGCCTTG ATGCCTCTAT CGGTGCACCG
CCGGATCCGC TTGGACCACA GGGACAAGAC TGGCAGCTCG CGCCGATGAA CCCCACCATG
ATGCAGCTGC GCGGCTATCA GCCGTTTATC GACGTACTGC GCAGTAACAT GGCGCACTGT
GGTGCGCTGC GTATCGATCA CGTGATGGCG CTCTTGCGCC TGTGGTGGAT CCCCAAGGCG
GAGACAGCAG GCAACGGGGC TTACGTACAT TATCCGGTTG ACGATCTGCT GGCGGTGCTG
GCGCTGGAAA GTCAACGTCA TCGCTGCCTG ATTATCGGCG AGGATTTAGG CACGGTTCCG
CCGGAAATTG TCAGCAAACT GCATGATTAC GGTATCTATT CTTACAAGGT GCTGTTCTTT
GAAAAAGATG AGGAGAACCA TTTCCGCGCA CCGGAAGATT ACCCGCGTCA GGCGATGACA
ACGATCACCA CGCACGATCT CCCGACGCTG CGCGGCTACT GGCAAACCGT GGATTTATCG
CTGGGACGGG AATTGGGGCT GTACCCGACG GAAACGCTAT TGCAAGAGCA GATGCAGCAG
CGTGAGAAAG CGAAACAGGG GCTGCTCAAC GCGTTGCATG AATTCGGGCT ATTGCCGCAG
CGGGTTGGCC GCAACTCGGC GCTGACGACG ATGGGCGCGC CGCTGAGTCG TGGCGTTCAC
CGCTATGTCG CTGATAGCGC CAGCGCGCTG GTGGGGTTCC AACTGGAAGA CTGGCTGGAT
ATGGCGACAC CGGTCAATGT GCCGGGTACC AATCGTGAAT ACCCCAACTG GCGGCGCAAA
CTTACGCGCC CGCTGGAGTC GATCTTTGCT GACCGCTGCC TTGAACGGCT GGTTCGGGAT
ATGGATTTGC GCCGTGGCGC ACCAATGAAA ACGCAGAAAG CCTAA
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| Protein sequence | MFKVDKLASQ QTGIAESYTD AYGKEHIVAA AIRNQIQAMM DVSDSGNAPL PPVRVFLQGR
DAVIELAGHG EFLWTLMYEN GGQIQGQITG GSTLALPGVL PLGYHYLTLT QADQRWSCRI
IVAPHRCYEP EALQQGKRWW GVTVQLYTLR SQNNWGVGDF GDLRHLVEQI ARRGGAFVGL
NPLHSLYPAL PEAASPYSPS SRHWLNIIYI DVNRIDDFQQ SEEAQAWWLR EDTQSAVTAL
RAGRWVDYEP VTALKLTALR LAFRYFTTRS TLDPRISAFR QFVVSGGQSL QLQATFDALQ
AYLKKQGENY ADWHQWPARY HDVHSETVKS FRREHSDEIT FYSWLQWVAH EQLAECYAHS
KQLGLPLGLY RDLAVGVAQG GAETWDERQL YCLDASIGAP PDPLGPQGQD WQLAPMNPTM
MQLRGYQPFI DVLRSNMAHC GALRIDHVMA LLRLWWIPKA ETAGNGAYVH YPVDDLLAVL
ALESQRHRCL IIGEDLGTVP PEIVSKLHDY GIYSYKVLFF EKDEENHFRA PEDYPRQAMT
TITTHDLPTL RGYWQTVDLS LGRELGLYPT ETLLQEQMQQ REKAKQGLLN ALHEFGLLPQ
RVGRNSALTT MGAPLSRGVH RYVADSASAL VGFQLEDWLD MATPVNVPGT NREYPNWRRK
LTRPLESIFA DRCLERLVRD MDLRRGAPMK TQKA
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