| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3912 |
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| Symbol | |
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| ID | 8134899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4404519 |
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| End bp | 4406852 |
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| Gene Length | 2334 bp |
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| Protein Length | 777 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644867219 |
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| Product | RNA binding S1 domain protein |
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| Protein accession | YP_003019463 |
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| Protein GI | 253690273 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGATT CATTAAGCCA CATCATCGCC AGCGAATTGC AGGCGCGTAC GGAGCAGGTG
GACGCCGCAG TCCGTCTGCT GGATGAAGGA AATACCGTCC CTTTTATCGC CCGTTACCGT
AAAGAAGTGA CCGGCGGGTT GGATGACACC CAGTTGCGCC AACTCGAAAC GCGCCTCGGC
TACCTGCGTG AACTGGAAGA TCGACGCCAG ACTATTCTGA AATCCATCGA CGAGCAGGGA
AAATTAACCC CACAGCTCGC GACTGCCATT AACGGCACGC TGAGCAAAAC CGAGCTGGAA
GATCTCTATC TGCCGTATAA ACCTAAGCGC CGCACACGTG GACAAATCGC GATTGAAGCC
GGTCTGGAAC CGCTGGCCGA CGGCCTGTGG CAAGACCCGA GCCAGGATCC AGAGCTGACG
GCACAGGCTT ATGTCGATGC CGAGAAAGGC GTGGCGGATG TGAAAGCTGC GCTGGATGGC
GCACGTTACA TCCTGATGGA GCGCTTTGCC GAAGACGCGA CGCTGCTGGC AAAAGTACGT
AACTACCTGT GGAAAAACGC GCATCTGGTT TCCCGCGTCG TGGAAGGGAA AGAAGAAGAA
GGCGCGAAGT TCCGCGACTA TTTCGATCAT CACGAACCGA TTGCTCAGGT GCCTTCACAC
CGCGCACTGG CCATGTTCCG TGGACGCAAT GAAGGCGTGC TGCAACTGGC GCTGAACGCC
GATCCGCAAC ATGAAGAAGC GCCGCGTGAG AGCTACTGCG AACAAATTAT TATCGACCAC
CTGAACCTGC GTTTGGGTAA TGCGGCAGCG GACAGCTGGC GGCGCGCCGT GATTAGCTGG
ACGTGGCGCA TTAAAGTCCT GCTGCACCTT GAAACCGAAC TGATGGGCAG CGTGCGCGAA
AAAGCCGAAG ACGAAGCGAT CAACGTCTTT GCCCGCAACA TGCACGACCT GCTGATGGCC
GCGCCGGCGG GCATGCGCGC CACGATGGGT CTCGATCCTG GCCTGCGTAC TGGCGTAAAA
GTTGCGGTGG TGGATGCCAC TGGCAAGCTG GTCGCGACCG ACACGATTTA TCCACATACC
GGTCAGGCAG CTAAAGCGGC GACGTCAGTG GCCACGCTGT GCCGCAAATA TCAGGTTGAG
CTGGTGGCGA TTGGCAACGG AACCGCCTCA CGTGAAACCG AGCGTTTCTT CCTCGATACG
CAGAAACAGT TCCCGGATAT CAATGCGCAG AAAGTAATCG TCAGCGAAGC TGGCGCGTCG
GTGTACTCCG CGTCCGAGCT GGCTGCGCTG GAATTCCCCG ATCTGGATGT GTCACTACGC
GGCGCGGTGT CCATCGCCCG TCGCTTGCAG GATCCTCTGG CGGAGCTGGT GAAGATCGAT
CCGAAATCCA TCGGCGTTGG TCAGTATCAG CATGACGTGA GCCAAAGCCT GCTGGCGAAG
AAACTGGATG CAGTGGTCGA AGACTGCGTA AACGCCGTCG GCGTTGATCT GAACACCGCC
TCCGTCGCGC TGCTGACACG TGTTGCAGGG CTGACGCGTA TGATGGCGCA AAATATTGTG
ACCTGGCGTG ATGAGAACGG CCGCTTCCAC AACCGTGAAC AGTTGCTGAA AGTCAGCCGT
CTGGGGCCAA AAGCCTTTGA GCAATGCGCG GGCTTCCTGC GTATTAACCA CGGCGATAAC
CCGCTGGATG CTTCTACCGT TCACCCGGAA GCCTATCCGG TCGTAGAACG CATTCTGGCC
GCGACCGAAC AGGCATTGCA GGCGCTGATG GGGAATCCAA ACACACTGCG TAACCTGAAA
CCGGCTGATT TCACCGATGA GCGTTTCGGC GTACCGACGG TGACCGACAT CATCAAAGAG
CTGGAGAAAC CAGGCCGCGA TCCGCGCCCT GAGTTCAAAA CCGCCAGCTT CGCCGAGGGT
GTGGAAACCT TAAACGATCT GCTGCCGGGT ATGATTCTGG AAGGTGCGGT CACCAACGTC
ACCAACTTTG GCGCGTTTGT GGATATCGGC GTTCATCAGG ACGGGTTGGT ACACATTTCA
TCACTGGCCG ATCATTTCGT TGATGACCCG CACAAGGTCG TGAAAGCGGG CGACATCGTG
AAAGTGAAAG TGATGGAAGT GGATCTGCAA CGCAAGCGCA TCGCGCTGAC CATGCGCCTT
GATGAGCAAC CGGGTGAGAC ATCATCACGC CGTGGCGGTG GCACAGCTCG CGGTGATAAC
AACACCTCAC CGCGTCAATC GACAGGCAAA TCACGTCCTC GTCCAGCGAA TACACCAGCT
ACAGGTAATA GCGCGATGGG TGATGCGTTA GCCGCCGCCT TTAAAAAACG TTAA
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| Protein sequence | MNDSLSHIIA SELQARTEQV DAAVRLLDEG NTVPFIARYR KEVTGGLDDT QLRQLETRLG
YLRELEDRRQ TILKSIDEQG KLTPQLATAI NGTLSKTELE DLYLPYKPKR RTRGQIAIEA
GLEPLADGLW QDPSQDPELT AQAYVDAEKG VADVKAALDG ARYILMERFA EDATLLAKVR
NYLWKNAHLV SRVVEGKEEE GAKFRDYFDH HEPIAQVPSH RALAMFRGRN EGVLQLALNA
DPQHEEAPRE SYCEQIIIDH LNLRLGNAAA DSWRRAVISW TWRIKVLLHL ETELMGSVRE
KAEDEAINVF ARNMHDLLMA APAGMRATMG LDPGLRTGVK VAVVDATGKL VATDTIYPHT
GQAAKAATSV ATLCRKYQVE LVAIGNGTAS RETERFFLDT QKQFPDINAQ KVIVSEAGAS
VYSASELAAL EFPDLDVSLR GAVSIARRLQ DPLAELVKID PKSIGVGQYQ HDVSQSLLAK
KLDAVVEDCV NAVGVDLNTA SVALLTRVAG LTRMMAQNIV TWRDENGRFH NREQLLKVSR
LGPKAFEQCA GFLRINHGDN PLDASTVHPE AYPVVERILA ATEQALQALM GNPNTLRNLK
PADFTDERFG VPTVTDIIKE LEKPGRDPRP EFKTASFAEG VETLNDLLPG MILEGAVTNV
TNFGAFVDIG VHQDGLVHIS SLADHFVDDP HKVVKAGDIV KVKVMEVDLQ RKRIALTMRL
DEQPGETSSR RGGGTARGDN NTSPRQSTGK SRPRPANTPA TGNSAMGDAL AAAFKKR
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