Gene PC1_3877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3877 
Symbol 
ID8134864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp4363620 
End bp4364624 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content53% 
IMG OID644867184 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_003019428 
Protein GI253690238 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAGC CCATTGTATT TAGCGGTGCG CAGCCGTCTG GTGAATTGAC CATTGGTAAC 
TACATGGGGG CGTTACGTCA GTGGGTCAAT ATGCAGGACG ATTACGACTG CATCTATTGC 
ATCGTGGATT TGCACGCCAT CACGGTACGT CAGGATCCGC AGGCGCTGAG AAAAGCGACG 
CTGGATACGC TGGCGCTGTA TCTGGCCTGT GGCATCGATC CGAAAAAGAG CACCATTTTT 
GTTCAGTCCC ACGTGCCTGA GCACAGCCAA CTGAGCTGGA TACTGAACTG TTACGCATAT 
TTCGGCGAAC TGAGCCGTAT GACGCAGTTC AAGGATAAAT CCGCGCGTTA TGAAGAGAAC 
ATCAACGCGG GTCTGTTCGA TTATCCGGTA CTGATGGCAG CAGACATCCT GCTGTACCAA 
ACGAATCAGG TGCCGGTGGG CGAAGATCAG AAGCAGCATC TGGAACTGAG CCGTGACGTT 
GGTCAGCGCT TCAACAGCCT GTATGGCGAT ATTTTCAAAG TGCCAGAGCC GTTCATTCCA 
AAATCGGGTG CGCGTGTGAT GTCGCTGCTG GAACCGACCA AGAAGATGTC CAAATCTGAC 
GATAACCGCA ATAACGTTAT CGGTCTGTTG GAAGATCCGA AAGCGGTGGT GAAGAAGATC 
AAACGTGCGG TGACGGATTC CGACGAGCCG CCAGTCGTGC GCTATGACGT GGCGAATAAA 
GCCGGGGTAT CGAACCTGTT GGATATTCTG TCTGGCGTGA CGGGAAAAAG CATCCCTGAG 
CTGGAGCAGG AATTCAACGG TCAGATGTAT GGCCACCTGA AAGGTGCGGT GGCGGATGCG 
GTATCCGGCA TGCTGTCTGA GCTGCAAGAG CGTTATCATC GTTTCCGTAA CGACGAAGCG 
TTCCTGCAAC AGGTGATGCG TGAAGGCGCT GAAAAAGCGA GTGCTCGCGC ACAGGAAACG 
CTGAAGAAAG TCTACGACGC TGTTGGCTTT GTTTCCCGCC CGTAA
 
Protein sequence
MSKPIVFSGA QPSGELTIGN YMGALRQWVN MQDDYDCIYC IVDLHAITVR QDPQALRKAT 
LDTLALYLAC GIDPKKSTIF VQSHVPEHSQ LSWILNCYAY FGELSRMTQF KDKSARYEEN 
INAGLFDYPV LMAADILLYQ TNQVPVGEDQ KQHLELSRDV GQRFNSLYGD IFKVPEPFIP 
KSGARVMSLL EPTKKMSKSD DNRNNVIGLL EDPKAVVKKI KRAVTDSDEP PVVRYDVANK 
AGVSNLLDIL SGVTGKSIPE LEQEFNGQMY GHLKGAVADA VSGMLSELQE RYHRFRNDEA 
FLQQVMREGA EKASARAQET LKKVYDAVGF VSRP