Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3827 |
Symbol | |
ID | 8134814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4309578 |
End bp | 4310762 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644867134 |
Product | translation elongation factor Tu |
Protein accession | YP_003019378 |
Protein GI | 253690188 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000173466 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCTAAAG AAAAATTTGA ACGTACAAAA CCCCACGTTA ACGTCGGTAC TATCGGCCAC GTTGACCATG GTAAAACGAC TCTGACTGCT GCAATCACTA CCGTTCTGGC TAAAACCTAC GGTGGTAACG CACGTGCATT CGACCAGATC GATAACGCAC CAGAAGAAAA AGCACGTGGT ATCACCATCA ACACATCTCA CGTTGAATAC GATACCCCGT CTCGCCACTA CGCGCACGTT GACTGCCCAG GACACGCCGA CTATGTGAAA AACATGATCA CCGGTGCTGC TCAGATGGAC GGCGCTATCC TGGTTGTTGC TGCGACTGAC GGCCCAATGC CTCAGACGCG TGAGCACATC CTGCTGGGTC GTCAGGTTGG CGTTCCTTTC ATCATCGTGT TCCTGAACAA GTGTGACATG GTTGATGACG AAGAGCTGCT GGAACTGGTT GAGATGGAAG TGCGTGAACT GCTGTCTCAG TACGACTTCC CAGGCGACGA CACCCCAGTA GTTCGTGGTT CTGCTCTGAA AGCGCTGGAA GGCGAAGCTG AGTGGGAAGC AAAAATCATC GAACTGGCAG AGCACCTGGA TTCTTATATC CCAGAGCCAG AGCGTGCAAT TGACAAGCCG TTCCTGCTGC CAATCGAAGA CGTATTCTCC ATCTCCGGTC GTGGTACCGT TGTTACCGGT CGTGTAGAGC GCGGTATCGT TAAAGTTGGT GAAGAAGTTG AAATCGTTGG TATCAAAGAT ACTGCGAAAT CTACCTGTAC TGGCGTAGAA ATGTTCCGCA AACTGCTGGA CGAAGGCCGT GCGGGTGAGA ACGTTGGTGT TCTGCTGCGT GGTATCAAGC GTGAAGAAAT CGAGCGTGGT CAGGTACTGG CTAAGCCGGG TTCAATCAAG CCACACACCA AGTTCGAATC AGAAGTGTAT ATCCTGAGCA AGGATGAAGG CGGCCGTCAT ACTCCGTTCT TCAAAGGCTA CCGTCCTCAG TTCTACTTCC GTACGACTGA CGTAACGGGC ACCATCGAAC TGCCAGAAGG CGTAGAGATG GTAATGCCGG GCGACAACAT CAAAATGGTT GTTACCCTGA TCCACCCAAT CGCGATGGAT GACGGTTTGC GTTTCGCAAT CCGTGAAGGC GGCCGTACAG TAGGCGCGGG CGTTGTTGCT AAAGTTATCG CTTAA
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Protein sequence | MSKEKFERTK PHVNVGTIGH VDHGKTTLTA AITTVLAKTY GGNARAFDQI DNAPEEKARG ITINTSHVEY DTPSRHYAHV DCPGHADYVK NMITGAAQMD GAILVVAATD GPMPQTREHI LLGRQVGVPF IIVFLNKCDM VDDEELLELV EMEVRELLSQ YDFPGDDTPV VRGSALKALE GEAEWEAKII ELAEHLDSYI PEPERAIDKP FLLPIEDVFS ISGRGTVVTG RVERGIVKVG EEVEIVGIKD TAKSTCTGVE MFRKLLDEGR AGENVGVLLR GIKREEIERG QVLAKPGSIK PHTKFESEVY ILSKDEGGRH TPFFKGYRPQ FYFRTTDVTG TIELPEGVEM VMPGDNIKMV VTLIHPIAMD DGLRFAIREG GRTVGAGVVA KVIA
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