Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3803 |
Symbol | rplO |
ID | 8134790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4299164 |
End bp | 4299598 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644867110 |
Product | 50S ribosomal protein L15 |
Protein accession | YP_003019354 |
Protein GI | 253690164 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0200] Ribosomal protein L15 |
TIGRFAM ID | [TIGR01071] ribosomal protein L15, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000421274 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTTAA ATACTCTGTC TCCGGCCGAA GGTGCTAAAC ACGCACCGAA GCGTTTAGGT CGTGGTATCG GTTCTGGCCT GGGCAAAACT GGCGGTCGTG GTCACAAAGG TCAGAAATCT CGTTCTGGCG GTGGCGTACG TCGTGGTTTT GAAGGTGGTC AGATGCCTTT ATACCGTCGT CTGCCGAAAT TCGGTTTTAC TTCTCGTAAA GCGATGATCA CGTCAGAAGT TCGTCTGTCT GATCTTGCTA AAGTAGAAGG CGACGTAGTT GACCTGAATA CGCTGAAAGC CGCTAATGTT ATTGGCATTC AGATTGAATT CGCGAAAGTG ATTCTGTCTG GTGAAGTTGC TCGTCCGGTA ACGATTCGTG GTCTGCGTGT CACTAAAGGT GCTCGTGCTG CTATCGAAGC TGCTGGCGGT AAAATTGAGG AATAA
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Protein sequence | MRLNTLSPAE GAKHAPKRLG RGIGSGLGKT GGRGHKGQKS RSGGGVRRGF EGGQMPLYRR LPKFGFTSRK AMITSEVRLS DLAKVEGDVV DLNTLKAANV IGIQIEFAKV ILSGEVARPV TIRGLRVTKG ARAAIEAAGG KIEE
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