| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3800 |
|---|
| Symbol | rpsM |
|---|
| ID | 8134787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 4297172 |
|---|
| End bp | 4297528 |
|---|
| Gene Length | 357 bp |
|---|
| Protein Length | 118 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644867107 |
|---|
| Product | 30S ribosomal protein S13 |
|---|
| Protein accession | YP_003019351 |
|---|
| Protein GI | 253690161 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0099] Ribosomal protein S13 |
|---|
| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0251117 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCCCGTA TAGCAGGCAT TAACATTCCT GATCATAAAC ATACCGTTAT TGCGTTAACG
TCGATTTTCG GTATCGGTAA AACCCGTTCG CAGGCTATTT GTGCTGCAAC AGGAATTGCC
GAAGATGTTA AGATCAGTGA GCTGTCTGAA GAGCAAATCG ATAAGCTGCG TGACGAAGTT
GCCAAGTTTG TTGTAGAAGG TGATCTGCGT CGTGAAGTTA CCCTGAGCAT CAAGCGTCTT
ATGGACCTTG GTACTTATCG TGGTTTGCGT CATCGTCGTG GTCTGCCGGT TCGCGGTCAG
CGTACCAAGA CTAACGCCCG TACCCGTAAG GGTCCGCGCA AACCGATCAA GAAATAA
|
|---|
| Protein sequence | MARIAGINIP DHKHTVIALT SIFGIGKTRS QAICAATGIA EDVKISELSE EQIDKLRDEV
AKFVVEGDLR REVTLSIKRL MDLGTYRGLR HRRGLPVRGQ RTKTNARTRK GPRKPIKK
|
|---|
| |