| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3785 |
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| Symbol | |
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| ID | 8134772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4286246 |
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| End bp | 4286815 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644867092 |
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| Product | SUA5/yciO/yrdC domain protein |
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| Protein accession | YP_003019336 |
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| Protein GI | 253690146 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000349894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTGATG TCTCTGATGA ACTAATGATT CCTGTTTTAC GGGAATTACA TAATGAACAG
GTTATTGCGT ACCCGACTGA GGCGGTATTC GGGTTGGGCT GCGATCCTGA TAGTGAAGTG
GCGGTTAATC GTCTGCTAGC CTTAAAACAG CGTCCTTGGC AAAAAGGGTT GATCCTGATT
GCAGCAGATT TTAGCCAACT GGCTCCTTAT ATTGATGACA GCGTGTTATC CGATGAGCAG
AAGGCGATGA TGTTTTCCAC ATGGCCTGGT CCGGTTACTT GGGTATTACC TGCAAAACGT
ACGACTCCAC AATGGTTAAC GGGGCAATTT TCTTCTCTTG CTGTGCGCGT TAGTGACCAT
CCGTTAGTTA AAGAACTGTG CCAGCGTTAC GGTAAACCGT TGGTGTCGAC CAGCGCCAAT
TTAAGTGGTC AACCTCCTTG CCGTACGGCT CAGGAAGTTT CTCAACAATT TGGTGATGAT
TTTCCTGTGC TAGCTGGCGA TGTTGGCGGA AGAATGAACC CATCCGAAAT CAGGGATGTA
TTAACAGGCG AGCTTATTCG TCAGGGGTAA
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| Protein sequence | MSDVSDELMI PVLRELHNEQ VIAYPTEAVF GLGCDPDSEV AVNRLLALKQ RPWQKGLILI
AADFSQLAPY IDDSVLSDEQ KAMMFSTWPG PVTWVLPAKR TTPQWLTGQF SSLAVRVSDH
PLVKELCQRY GKPLVSTSAN LSGQPPCRTA QEVSQQFGDD FPVLAGDVGG RMNPSEIRDV
LTGELIRQG
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