Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3753 |
Symbol | |
ID | 8134736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4240401 |
End bp | 4240943 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644867056 |
Product | oligoribonuclease |
Protein accession | YP_003019304 |
Protein GI | 253690114 |
COG category | [A] RNA processing and modification |
COG ID | [COG1949] Oligoribonuclease (3'->5' exoribonuclease) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAGATG AAAATAACCT GATCTGGATC GATCTCGAAA TGACCGGTTT GAACCCGGAG CGCGATCGTA TTATTGAGAT CGCAACGCTG GTGACGGATG CCAATCTGAA TGTGTTGGCT GAAGGGCCGG TACTGGCGGT GCATCAGTCT GATAGCCAAC TGGCGCTGAT GGATGACTGG AATGTACGCA CACACGGTGC CAGCGGCCTG ACAGATCGCG TTAAAGCGAG TACCACGGAT GAACGTGCCG CCGAGCTGGA AACGCTGGCG TTTCTACAAA AATGGGTGCC GGCGGGTAAA TCGCCAATCT GCGGCAACAG CATCGGTCAG GATCGCCGCT TTCTGTTCCG CTATATGCCG GAGCTGGAAG CTTACTTCCA CTACCGCTAC CTGGATGTCA GCACGCTCAA AGAGCTGGCG CGACGCTGGA AACCGGAAAT CCTGACGGGC TTTAAGAAAC AAGGCACGCA TCAGGCGATG GACGACATTC GCGAATCACT GGCAGAGCTG GCTTATTACC GTGAGAATTT TCTGCGGCTG TAG
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Protein sequence | MVDENNLIWI DLEMTGLNPE RDRIIEIATL VTDANLNVLA EGPVLAVHQS DSQLALMDDW NVRTHGASGL TDRVKASTTD ERAAELETLA FLQKWVPAGK SPICGNSIGQ DRRFLFRYMP ELEAYFHYRY LDVSTLKELA RRWKPEILTG FKKQGTHQAM DDIRESLAEL AYYRENFLRL
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