Gene PC1_3712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3712 
Symbol 
ID8134692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp4190677 
End bp4191240 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content51% 
IMG OID644867012 
Producthypothetical protein 
Protein accessionYP_003019263 
Protein GI253690073 
COG category[K] Transcription 
COG ID[COG1678] Putative transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.081023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTAC AGCATCACTT CCTCATTGCT ATGCCAGCAC TACAGGACTC TGTATTTAAA 
CGTTCGGTGG TCTATATCTG CGAACATAAT GAAGACGGAG CCATGGGGCT GATCATCAAC 
AAACCGATGG ATCAGTTTTC TGTGGAAAAT GTGCTGAAAA AGCTAAAAAT AGATCCGACA 
CCACGCGATC CAGCCATTCG ATTGGATAAA CCCGTCTTCA TGGGCGGCCC ACTGGCGGAC 
GACCGTGGCT TTATCCTGCA TACGCCCTGC CCCGGCTTTG GTTCCAGCAT CAGCATCTCT 
GAAGACACGA TGATCACCAC GTCAAAAGAC GTGCTGGAAA CGTTAGGCAC GCCGAGTCAG 
CCGGAAAATA CGCTGGTCGC CTTAGGCTAT TCCGCCTGGG AGAACGGTCA GTTGGAAGAA 
GAACTGTTAG AAAATGCCTG GCTGACAACG CCAGCCGATA AAGACATTCT GTTCCACACG 
CCGATTGCGG AACGCTGGCG AGCGGCGGCC AGAAAGTTGG GTATCGATAT TCATAATATC 
TCGACCGAAG CGGGACATGC CTGA
 
Protein sequence
MNLQHHFLIA MPALQDSVFK RSVVYICEHN EDGAMGLIIN KPMDQFSVEN VLKKLKIDPT 
PRDPAIRLDK PVFMGGPLAD DRGFILHTPC PGFGSSISIS EDTMITTSKD VLETLGTPSQ 
PENTLVALGY SAWENGQLEE ELLENAWLTT PADKDILFHT PIAERWRAAA RKLGIDIHNI 
STEAGHA