Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3683 |
Symbol | |
ID | 8134663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4157687 |
End bp | 4158346 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644866983 |
Product | ribose-5-phosphate isomerase A |
Protein accession | YP_003019234 |
Protein GI | 253690044 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0120] Ribose 5-phosphate isomerase |
TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCAAG ATGAACTGAA AAAAGCAGTG GGATGGGCAG CGCTAGACTA TGTCCGCCCG GACACCATTG TGGGAGTAGG AACCGGATCG ACGGCGGCAC ATTTTATTGA TGCGCTGGGT TCGATAAAAC ACCAAATCAA AGGCGCGGTC TCCAGCTCGG ATGCCTCAAC GGAAAAACTG AAAAGTCTGG GTATCCCCGT CTTTGACGCC AATGAAGTCG ATTCGCTGGA TGTTTACGTC GATGGTGCCG ATGAGATCAA CGGACATATG CAGATGATTA AAGGCGGCGG TGCGGCACTG ACCCGCGAGA AAATCATTTC GGCGCTGTCG CGTCAGTTCA TCTGCATTGT TGATGCCTCT AAGCAGGTTG ATGTGCTAGG TAAATTCCCG CTGCCGGTTG AAGTTATTCC GATGGCGCGG TCTTACGTCG CGCGTGAACT GGTGAAGCTA GGCGGGCAGC CGGTCTATCG TCAGGGCGTC GTGACGGATA ACGGCAACGT CATTCTGGAT GTACACAACC TGAATATCAT GGATGCGATC GCGGTAGAAA ATCACATCAA TGGTATCCCA GGCGTGGTGA CCGTTGGGCT GTTTGCCAAC CGCGGTGCGG ATGTCGCGTT AGTCGGCACG TCTGAGGGTG TAAAAACCGT CGTTAAATGA
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Protein sequence | MTQDELKKAV GWAALDYVRP DTIVGVGTGS TAAHFIDALG SIKHQIKGAV SSSDASTEKL KSLGIPVFDA NEVDSLDVYV DGADEINGHM QMIKGGGAAL TREKIISALS RQFICIVDAS KQVDVLGKFP LPVEVIPMAR SYVARELVKL GGQPVYRQGV VTDNGNVILD VHNLNIMDAI AVENHINGIP GVVTVGLFAN RGADVALVGT SEGVKTVVK
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