Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3661 |
Symbol | |
ID | 8134641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4131817 |
End bp | 4133154 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644866961 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003019212 |
Protein GI | 253690022 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.755106 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCAGG ATCAACACGC CGATCCTCGC CGGTTGAACC GGCAGGACTA TAAAACGCTG TCTCTGGCTG CGCTGGGTGG CGCGTTAGAG TTTTATGACT TTATTATTTT CGTCTTCTTT GCTGCCGTGA TTGGCGATCT CTTCTTCCCG CCGGATATTC CTGAATGGCT GCGGCAGGTG CAGACGTTCG GTATTTTCGC CGCAGGCTAT CTGGCTCGCC CGCTTGGGGG CATTATCATG GCCCACTTCG GTGATAAGAG CGGACGTAAA AGAATGTTCA GCCTCAGTAT ATTGCTGATG GCGCTACCGA CGCTGGCAAT GGGGCTGCTG CCGACTTATG AAGCTATTGG CATTGCGGCG CCGCTTCTGC TGCTGTTGAT GCGTGTACTG CAAGGGGCGG CAATCGGCGG GGAAGTCCCC GGTGCGTGGG TCTTTGTTGC GGAGCATGTG CCTCGCGCCC GCATCGGGTT TGCCTGCGGT ACGCTGACCG CCGGGCTGAC GATGGGGATC CTGTTGGGCT CGCTGATTGC GACGCTGCTG AATACTGTGC TTACGCCGGA GCAGATGTCG GGCGGTGGCT GGCGTCTGCC GTTCTTCATC GGTGGGGTCT TCGGCCTTGT TGCCATGTAT TTGCGCCGCT GGTTGCAGGA AACGCCTATT TTTATGGAAA TGCAGGCGCA GAAAAAGCTG GCGGAAGAGC TGCCGCTGAA ATCTGTCGTC TTAAACCATA AACGTGCGGT TGTGGTTTCA ATGCTACTGA CCTGGCTGCT GTCTGCGTGC ATCGTCGTCG TGATTCTGAT GGCACCGACC TACCTGCAAA AAGTCCACGG CATTCCTGCC GCATTGGCGT TGCAGGCGAA CTGTCTGGCA ACGATTGCGC TGATGGTGGG CTGCATCGGT GCAGGGCTGC TGGTCGACCG CTTTGGTGCC AGCAAGCTGT TTATGGTGGG TAGCCTGTCG CTGGCTGCCT GTAGCTGGTT CTTTTACAGC TCAGCAGCAA GCAGTACGAC ACTGCTCTTT GTCAGCTATG CGATTGTGGG GCTCAGCGTG GGGGTCGTGG GCGGCGTGCC TTATGTCATG GTGCGGGCGT TTCCTGCTGC GGTGCGGTTC TCAGGGATTT CTTTTTCCTA TAACGTTTCC TATGCCATTT TCGGCGGTCT GACACCCGTC TTTGTCACGC TGATCATGAA GGCGACGCCG CTGGCGCCGG CATTTTATGT CCTGACGCTA GCCGCAGTAG GGTTGCTGTT GGGGATTTAT TTGCAGCGCG ATCTGGATGC TGATTCGCGA GCGTTGGCCG ACAGCGACGC GCGCGCTCGT TCGCCTGTTG AGGTGTAA
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Protein sequence | MTQDQHADPR RLNRQDYKTL SLAALGGALE FYDFIIFVFF AAVIGDLFFP PDIPEWLRQV QTFGIFAAGY LARPLGGIIM AHFGDKSGRK RMFSLSILLM ALPTLAMGLL PTYEAIGIAA PLLLLLMRVL QGAAIGGEVP GAWVFVAEHV PRARIGFACG TLTAGLTMGI LLGSLIATLL NTVLTPEQMS GGGWRLPFFI GGVFGLVAMY LRRWLQETPI FMEMQAQKKL AEELPLKSVV LNHKRAVVVS MLLTWLLSAC IVVVILMAPT YLQKVHGIPA ALALQANCLA TIALMVGCIG AGLLVDRFGA SKLFMVGSLS LAACSWFFYS SAASSTTLLF VSYAIVGLSV GVVGGVPYVM VRAFPAAVRF SGISFSYNVS YAIFGGLTPV FVTLIMKATP LAPAFYVLTL AAVGLLLGIY LQRDLDADSR ALADSDARAR SPVEV
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