Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3648 |
Symbol | |
ID | 8134628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4115797 |
End bp | 4116945 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644866948 |
Product | carbamoyl phosphate synthase small subunit |
Protein accession | YP_003019199 |
Protein GI | 253690009 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.48497 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATTAAGT CAGCGCTATT GGTTCTGGAA GACGGAACCC AATTCCACGG TCGGGCCATT GGGGCAGAAG GGTCGGCAGT GGGGGAAGTG GTCTTCAATA CGTCGATGAC CGGTTATCAA GAAATCCTTA CTGATCCTTC CTATTCCCGC CAGATTGTCA CTCTCACTTA TCCCCATATC GGTAATGTCG GCGCCAATGC CAACGATGAA GAATCCCCCT CTGTACAGGC TCAAGGTCTG GTTATTCGCG ATTTACCTCT GATTGCCAGC AACTACCGCA GTGAAGAAAG CCTGTCTGAA TACCTCAAAC GCAACAACAT CGTCGCCATT GCTGATATCG ATACCCGTAA ACTGACCCGT CTGCTGCGTG AAAAAGGCGC ACAGAATGGC TGCATCATCG CGGGCGATGC GCCGGATGCC GCTGTTGCGC TGGAGAAAGC GAAAGCGTTC CCAGGGCTGA AAGGGATGGA TTTGGCAAAA GAAGTGACGA CGGCAGAAAG CTACAGCTGG TTACAGGGAA GCTGGACGCT GGAAGGCGAA TTGCCTGCGG CGAAAAACGA AAGTGAGCTG CCTTACCACG TCGTGGCCTA TGACTACGGT GTGAAACGCA ACATTCTGCG TATGCTGGTG GATCGCGGCT GCCGTCTGAC GGTTGTTCCG GCGCAGACAC CTGCCGAAGA TGTGCTGAAA CTGAATCCAG ACGGCATTTT CCTCTCTAAT GGCCCGGGCG ACCCAGAGCC GTGTGATTAC GCGATTCGCG CGATTAAAAC CTTCCTGGAC ACGGATATTC CGGTATTCGG TATCTGCCTG GGTCACCAAC TGCTGGCGCT GGCGAGCGGT GCGAAGACCA TCAAAATGAA GCTGGGTCAC CACGGCGGCA ACCATCCGGT AAAAGATCTG GATAACAACT GTGTGATGAT CACCGCGCAG AACCACGGCT TTGCGGTGGA TGAAAACAAT CTGCCTGATA CGCTGCGCGT CACGCATAAA TCCCTGTTTG ACCACACGGT TCAGGGGATT CACCGCACGG ATAAGCCAGC GTTCAGCTTC CAGGGTCACC CAGAAGCCAG CCCGGGCCCG CATGATGCTG CGCCGCTGTT CGACCACTTT ATTGACTTGA TTCAGACTTA CCGTTCTTCA GCTAAATAA
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Protein sequence | MIKSALLVLE DGTQFHGRAI GAEGSAVGEV VFNTSMTGYQ EILTDPSYSR QIVTLTYPHI GNVGANANDE ESPSVQAQGL VIRDLPLIAS NYRSEESLSE YLKRNNIVAI ADIDTRKLTR LLREKGAQNG CIIAGDAPDA AVALEKAKAF PGLKGMDLAK EVTTAESYSW LQGSWTLEGE LPAAKNESEL PYHVVAYDYG VKRNILRMLV DRGCRLTVVP AQTPAEDVLK LNPDGIFLSN GPGDPEPCDY AIRAIKTFLD TDIPVFGICL GHQLLALASG AKTIKMKLGH HGGNHPVKDL DNNCVMITAQ NHGFAVDENN LPDTLRVTHK SLFDHTVQGI HRTDKPAFSF QGHPEASPGP HDAAPLFDHF IDLIQTYRSS AK
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