| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3639 |
|---|
| Symbol | |
|---|
| ID | 8134619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 4106892 |
|---|
| End bp | 4107416 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644866939 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003019190 |
|---|
| Protein GI | 253690000 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3238] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTTAT TCTCTTCTTT TTCTCTCTCA TTGCTGCTGC CGCTGGGTAT TGCTGTGCTT
GCCGGGAGCA TTGTGCCTTT TCAGGCTGCC AGCAATGCGG CGCTGGGGCG TGCGTTAGGC
CATCCTCTTT GGGCAACGCT GGTCTCCCTG CTGGTCAGTA TTTGTGTGTT ATTACCGATC
CTGTTTGCTG CCCGGATACC GACGCCTGCG GTTGGCGCTG CTTTGCAGGG GCCGTGGTGG
GTTTGGCTGG GGGGCGTCGC GGGCGTTGCT TATATCACTG CTGCGTTATT GCTGACGCCA
AAGCTCGGTG CCTCAGGCTT TATTGTCTGT GTGATTGCTG GTCAGGTGGT GGCATCGCTG
ATTATCGATC ATTTTGGTTT GATGGGGCTG GCGGTGAAGC CTGCGACGCT GGGGAGAATC
GCGGGGGTTG CGTTAATCGT TATGGGGATG CTGGTGGTGC AATACTCTGC GGTTTCTCCG
CCGCTGACAA AACCTGCCGT TGAAACCCAT AAGCAACCAC AATGA
|
|---|
| Protein sequence | MSLFSSFSLS LLLPLGIAVL AGSIVPFQAA SNAALGRALG HPLWATLVSL LVSICVLLPI
LFAARIPTPA VGAALQGPWW VWLGGVAGVA YITAALLLTP KLGASGFIVC VIAGQVVASL
IIDHFGLMGL AVKPATLGRI AGVALIVMGM LVVQYSAVSP PLTKPAVETH KQPQ
|
|---|
| |