| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3634 |
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| Symbol | pdxA |
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| ID | 8134614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4103467 |
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| End bp | 4104468 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644866934 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_003019185 |
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| Protein GI | 253689995 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGACTG AGAGCAATAC ACCACGCGTT GTGATCACCC CCGGCGAACC CGCCGGGATT
GGCCCCGATC TGGTGATTGC TCTGGCTCAG CAGGCCTGGC CTGTAGAGCT AGTGATCTGT
GCGGATCCTG ACCTGTTATT AACTCGCGCA TTACAGCTGT CTATGCCGCT GACATTGCGC
GACTATCAAC CCGGCCAGCC CGCACAGCCA CAGCAGGCAG GTAGCCTCAC CATCCTGCCG
ATCGCCACAT CGGCAACCGT CATTGCCGGC CAATTGAATG TCGCGAACAG CGCTTATGTC
GTTGAGACAT TGGCTCGTGC TTGTGATGGC TGCCTGAACG GTGAATTCGC CGCGCTGATT
ACCGGCCCGG TGCATAAAGG CATTATCAAT GATGCTGGTG TTCCGTTCAG TGGACACACG
GAATTTTTCG CCGATCGCAG CCACTGTGAC CGTGTCGTCA TGATGCTGGC GACGGAAGAA
CTGCGTGTTG CCTTAGCGAC CACGCATTTG CCGCTTGCGG CCGTTTCTGC GGCTATTACC
CGCCAGAGCC TGCACGAAGT CATCACGATT TTGCACCATG ATTTGCAGAC AAAATTCGGC
ATCGTTCAAC CGCAGATTTA TGTTTGTGGA TTGAATCCTC ATGCCGGTGA AGGCGGCCAT
ATGGGCCGTG AAGAGCTGGA TGTGATTAAC CCTGCGCTGG ACGAACTTCG GCAGCAAGGC
ATCACGCTGG TTGGGCCGCT GCCTGCCGAC ACGCTTTTCC AGCCCAAATA TCTGCAACAC
GCTGACGCCG TGTTGGCGAT GTACCACGAT CAAGGGCTCC CGGTTCTGAA ATATCAGGGC
TTCGGGCGCG CCGTTAATAT CACGCTGGGG TTACCCTTTA TTCGCACATC AGTTGACCAC
GGAACAGCAC TTGAGCTGGC CGCAACGGGT AGCGCCGACC CCGGCAGCTT CATCACGGCA
TTAAATCTTG CCATTAAAAT GATAAAACAC AGTAATGAAT AA
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| Protein sequence | MQTESNTPRV VITPGEPAGI GPDLVIALAQ QAWPVELVIC ADPDLLLTRA LQLSMPLTLR
DYQPGQPAQP QQAGSLTILP IATSATVIAG QLNVANSAYV VETLARACDG CLNGEFAALI
TGPVHKGIIN DAGVPFSGHT EFFADRSHCD RVVMMLATEE LRVALATTHL PLAAVSAAIT
RQSLHEVITI LHHDLQTKFG IVQPQIYVCG LNPHAGEGGH MGREELDVIN PALDELRQQG
ITLVGPLPAD TLFQPKYLQH ADAVLAMYHD QGLPVLKYQG FGRAVNITLG LPFIRTSVDH
GTALELAATG SADPGSFITA LNLAIKMIKH SNE
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