Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3574 |
Symbol | |
ID | 8134554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 4030964 |
End bp | 4031854 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644866874 |
Product | quinolinate phosphoribosyltransferase |
Protein accession | YP_003019125 |
Protein GI | 253689935 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0157] Nicotinate-nucleotide pyrophosphorylase |
TIGRFAM ID | [TIGR00078] nicotinate-nucleotide pyrophosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.59167 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAACGC GTCGCTACAG TCAGGAACAA CGTCAAAAAA CCTTGCTCGC TCGTATTGCA CAAGATATCC CCGCCAGCGT GCAACTGGCC TTGCGTGAAG ACTTAGGTGG CATCGTCGAT GCCCATCAAG ACATTACCGC GCTTCTGTTA CCCGACAACG AGACCGTCAG CGCACGCATT ATCACGCGTG AAGCGGGTAT CTTCTGCGGT GCGCGTTGGC TTGAAGAAGT CTTTTCTCAA TTGGGCAACA CAACAACGAT CGTCTGGCAC GTCGCCGATG GCGATGCCAT CCCCCCCAAC CAAACGCTAT GTGAGATTAC GGGGCCAGCC AAGCAGCTTC TGACTGGCGA GCGCACGGCG CTAAATTTCC TGCAAACGCT GTCTGGCGTC GCAACGGAAG TCAGCCGCTA TGTCGCGGTA TTGCAGGGAA CGCGCACTCG GCTGCTGGAT ACACGTAAAA CGCTGCCAGG ACTGCGAACC GCACTGAAAT ACGCCGTATC ATGTGGTGGT GGAGATAACC ATCGGCTCGG CCTATCCGAT GCTTTTCTGA TTAAGGAAAA CCATATCATC GCCGCTGGCT CAATCAAAAA TGCGGTCGAA AAAGCACAGT TTCTGCGCAA TGATGTTCCG GTAGAAGTTG AAGTCGAATC GCTGGATGAA TTACAGCAGG CGCTGGACGC AGGTGCCGAT ATCATCATGC TGGATAATTT CAGTCTGGAT AACATTCGGG AAGCCGTTAA CACCACACAA GGCCGCGCAC TACTGGAGAT ATCCGGTAAT GTCACCCTCG ACACGCTGCG TGGCTATGCA GAAACCGGCG TGGACTATAT CTCGGTGGGG GCGTTAACCA AGCACGTACA GGCGCTGGAT TTATCCATGC GCTTTATTTA A
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Protein sequence | MSTRRYSQEQ RQKTLLARIA QDIPASVQLA LREDLGGIVD AHQDITALLL PDNETVSARI ITREAGIFCG ARWLEEVFSQ LGNTTTIVWH VADGDAIPPN QTLCEITGPA KQLLTGERTA LNFLQTLSGV ATEVSRYVAV LQGTRTRLLD TRKTLPGLRT ALKYAVSCGG GDNHRLGLSD AFLIKENHII AAGSIKNAVE KAQFLRNDVP VEVEVESLDE LQQALDAGAD IIMLDNFSLD NIREAVNTTQ GRALLEISGN VTLDTLRGYA ETGVDYISVG ALTKHVQALD LSMRFI
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