| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3573 |
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| Symbol | |
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| ID | 8134553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4029958 |
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| End bp | 4030818 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644866873 |
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| Product | nucleoside-specific channel-forming protein Tsx |
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| Protein accession | YP_003019124 |
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| Protein GI | 253689934 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3248] Nucleoside-binding outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.772906 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA CTTTCGCCGC AGGCGCCTTG CTCGCACTGT CATGCTCAAT GCCTGCCCTT
GCCGACAACA ATAAAGCCGA ATACCTCTCC GACTGGTGGC ACCAGAGTAT TAACGTCGTC
GGCAGCGCCC ACACGCGTTT TGGACCGCAA CTGAACAGCA CGACCTATCT GGAATACGAA
GCGTTTGCAC GTAAAGACTG GTTCGATTTC TACGGCTACG CCGATGCGCC GAAGTTTTTT
GGTGGCGATC CCGCTAGCCG CGGTATTTGG GACAAAGGCT CTCCTCTGTT TGTCGAGATC
GAACCACGCT TCTCCATTGA TAAACTGACG GGAACTGACC TCAGCTTTGG TCCGTTTAAA
GAGTGGTACA TCGCCAATAA CGTTATTTAC GATCAGGGTC GTAACAGCGG TTCACGCCAG
AGCACCTGGT ACATGGGGTT AGGCACCGAT ATTGATACCG GTACCGATCT GTCTCTGTCA
CTGAACGGCT ATGCCAAATA CCAATGGCAA AACTACGGCG CCGCTAACGA AAACGAGTGG
GACGGCTACC GCGTAAAAGT GAAATACTCT TACCCACTGG GCTCTCTGCT GGGCGGAAAC
GTCTCGTATA TCAGCTTCAC CAATTTCGAT TTTGGTTCAG AGCTGCGTGA TAAATCAAAT
GCAAGCCGTA CCAACAACTC TATTGCCTCC AGCCATATTC TGGCGCTGGG CTACGACCAC
TGGCACTACT CTTTCGTCGC ACGTTATTTC CACAACGGCG GCCAATGGGC TGATGGCGCA
GAACTCAATT TCGGCAAAGG TCCGTTTGAA GTGAAATCTA CCGGCTGGGG ATACTATCTG
GTCGTCGGTT ATAACTTCTA A
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| Protein sequence | MKKTFAAGAL LALSCSMPAL ADNNKAEYLS DWWHQSINVV GSAHTRFGPQ LNSTTYLEYE
AFARKDWFDF YGYADAPKFF GGDPASRGIW DKGSPLFVEI EPRFSIDKLT GTDLSFGPFK
EWYIANNVIY DQGRNSGSRQ STWYMGLGTD IDTGTDLSLS LNGYAKYQWQ NYGAANENEW
DGYRVKVKYS YPLGSLLGGN VSYISFTNFD FGSELRDKSN ASRTNNSIAS SHILALGYDH
WHYSFVARYF HNGGQWADGA ELNFGKGPFE VKSTGWGYYL VVGYNF
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