Gene PC1_3545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3545 
Symbol 
ID8134525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3994814 
End bp3995230 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content44% 
IMG OID644866846 
Productsmall multidrug resistance protein 
Protein accessionYP_003019097 
Protein GI253689907 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACTGA GAAAGCAATC ATGGCTTTGG ATGTTATTAG TTATCCTGTC AGAAACGTCT 
GCTACCTCTA CGTTAAAAAT GTTTGATAAT AGTCAAGGGA TAACAAAAGT AGCGTTATTA
GCGGTAATTA TTCTGCTGTA CTGCGTTTGC TATTATTCGC TATCAAAAGC GGTAAAACAT
CTTCCCGTGG GCTTAGCCTA TGCAACCTGG TCCGGTACGG GGATCTTATT GGTTTCGACG
CTCAGTATTA TCTTTTACGG CCAGCGTCCT GATATTCCGG CCATCATTGG CATGAGCGTG
ATTGCCGCTG GCATAGCAAT CATGAACCTC TTCTCTAAGA TGGGCGCTGA TGAACAGCCC
GAAATACTCA CGGACAGCGT TCCGAATCCA CCGTTAAACA CCAAAATCAT CCATTAA
 
Protein sequence
MSLRKQSWLW MLLVILSETS ATSTLKMFDN SQGITKVALL AVIILLYCVC YYSLSKAVKH 
LPVGLAYATW SGTGILLVST LSIIFYGQRP DIPAIIGMSV IAAGIAIMNL FSKMGADEQP
EILTDSVPNP PLNTKIIH