| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3540 |
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| Symbol | |
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| ID | 8134520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3988220 |
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| End bp | 3989407 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644866841 |
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| Product | hypothetical protein |
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| Protein accession | YP_003019092 |
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| Protein GI | 253689902 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4692] Predicted neuraminidase (sialidase) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.326221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAGCG AAATCATTAC CGTGGAACGT AGCGGAAAAG TTCATCACGC AGAAGGCGAT
GCCGCGCGTC TGGATGCCTA CATTCCGTCG GAATGCCCGC AGAATCATGC GGCCAACCTG
CTCCATCTGC CAAACGGCGA TGTGCTGTGC GTCTGGTTCG GCGGCACACA GGAAGGGATT
GCAGATATCT CTATCTACAT GTCCCGTCTG GTGAAAGGCA GCGATAACTG GAGCAAAGCC
GTTAAGCTGT CTGAGGATGC CACGCGTTCC GAACAGAACC CGGTTCTGTT CCTCGCGCCG
GATAATGTGC TGTGGCTACT GTATACCGCA CAAAAATCCG GTAATCAGGA CACCGCCATT
GTGCGCTACC GTCAATCCAC GGATTTCGGC GCCAGTTGGG GCGAGATCGG CACATTGCTC
GACCAACCGG GAACGTTCAT CCGCCAGCCA ATCACCGTGC TGGCAAACGG CGACTGGCTG
CTGCCAGTGT TCTACTGCCG CGTTCAGCCG GGTGAGAAGT GGGTCGGCAA CAACGATGAC
AGCGCCGTGA AAATTTCCAG CGATCAGGGT AAAACCTGGC GGGAATATCC GGTGCCAAAC
AGCACGGGCT GCGTACATAT GAACATCACC CCGTTGCAGG ATGGCACGCT GCTGGCGCTA
TACCGCAGCC GCTGGGCTGA TTTCATCTAC CAAAGTCGTT CAACGGATGG CGGTAAAACC
TGGTCAGATC CCGTGCCGAC CGATTTGCCC AACAACAACT CATCTATTCA GGTGACGACG
CTGAAAAACG GCCATCTGGC GCTGGTGTTC AACCACATGA GCGCCGCCGA TGCCACCGAG
CGCCGTCTGT CGCTGTACGA TGAAATCGAG GATGAAGAAG ACAAAGCCAG CAATGCCAAA
ATGCCGGAAG TTCAGGCGGG CAGCCGCAGC GCCTTCTGGG GTGCCCCGCG TGCACCGATG
ACGCTCGCCA TTTCGGAAGA CGGCGGTAAG AGCTGGCCGT GGCAGCGTAA TATTGAAGTG
GGCGACGGCT ACTGCATGAC CAACAACTCA ACCGAGAAGC TGAACCGCGA GTTCTCTTAC
CCCAGCGTCA AACAGGCGCA GGACGGTAAA CTGCACGTGG CGTTCACCTA CTTCCGTCAG
GCGATCAAGC ACGTCGTGGT AAGTGAAGAG TGGGTCAAGG CGAACTAA
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| Protein sequence | MSSEIITVER SGKVHHAEGD AARLDAYIPS ECPQNHAANL LHLPNGDVLC VWFGGTQEGI
ADISIYMSRL VKGSDNWSKA VKLSEDATRS EQNPVLFLAP DNVLWLLYTA QKSGNQDTAI
VRYRQSTDFG ASWGEIGTLL DQPGTFIRQP ITVLANGDWL LPVFYCRVQP GEKWVGNNDD
SAVKISSDQG KTWREYPVPN STGCVHMNIT PLQDGTLLAL YRSRWADFIY QSRSTDGGKT
WSDPVPTDLP NNNSSIQVTT LKNGHLALVF NHMSAADATE RRLSLYDEIE DEEDKASNAK
MPEVQAGSRS AFWGAPRAPM TLAISEDGGK SWPWQRNIEV GDGYCMTNNS TEKLNREFSY
PSVKQAQDGK LHVAFTYFRQ AIKHVVVSEE WVKAN
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