Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3473 |
Symbol | |
ID | 8134453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3918398 |
End bp | 3919003 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644866774 |
Product | NUDIX hydrolase |
Protein accession | YP_003019025 |
Protein GI | 253689835 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.672777 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAACA CGACTTATGC ACCCTCTGCC ACGACGGCGG TCGTCAATGA CAGCTGGGTA TTAGCCAATG ACTGGGGAAA GCTAACCAAA TACGACATCA CGTACACGCG TTCAAACGGA ACGGAACAGC GCCTGATTCG TGAAGCCTAT GACCGTGGTC ATGGCGCGAC CATTGGGCTC TACAACGCGG ATGCGCGTAC GGTCATTCTC ACCAGCCAGT TTCGTCTGCC AGCCTTTTTG ATTGGCCACC ATTATGAGCT TATTGAAGCG TGCGCAGGCC TGTTGGATGA ACGTGACCCG ATTCAGGCCA TCAGAAAAGA GGCGGAGGAG GAAACCGGAT ATAAACTCAA TGACGTCACC AAAATTGGCG AAATATTCAT GAGTCCCGGA TCTGTGACCG AACGTCTACA CTTCTTTATT GCGCCTTTTA CGCATGAGAT GCGAATTAAT GAAGGCGGCG GTATTGCCGA AGAAGGCGAA GATATCAAGG TCATGGAAAT TCCGATTAAA GATGCGCTGC AAATGATTGA TGACGGCCAG ATTATTGATG CCAAAACCAT TATTTTGCTT CAGCACCTGG TTATTAAAAA TATTTGTAAG CCGTAA
|
Protein sequence | MKNTTYAPSA TTAVVNDSWV LANDWGKLTK YDITYTRSNG TEQRLIREAY DRGHGATIGL YNADARTVIL TSQFRLPAFL IGHHYELIEA CAGLLDERDP IQAIRKEAEE ETGYKLNDVT KIGEIFMSPG SVTERLHFFI APFTHEMRIN EGGGIAEEGE DIKVMEIPIK DALQMIDDGQ IIDAKTIILL QHLVIKNICK P
|
| |