Gene PC1_3452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3452 
Symbol 
ID8134432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3898984 
End bp3899538 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content54% 
IMG OID644866753 
Producthypothetical protein 
Protein accessionYP_003019004 
Protein GI253689814 
COG category[S] Function unknown 
COG ID[COG0762] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0294828 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCACCC TGACTTTTCT GGTCAAAACG CTGGTCGACC TCTATGTAAT GGTCCTGCTG 
CTACGCATCT GGATGCAGTG GTCACGCAGC GATTTCTATA ACCCGCTGTC GCAGTTTGTC
GTCAAAATCA CCCAGCCGAT TGTCGGGCCG CTGCGCCGCA TTTTGCCGTC ATTAGGGCCG
ATTGACAGCG CCTCGCTGCT GCTGGCTTTT ATTCTCACGA CGATCAAATA CCCGTTACTG
CTGTTGATTC AGGTTGGCGC GATTTCCCTC AGCCCAATGA ACCTGCTGGT CGGGCTCATT
TCGCTGATTA AATCCGCGGG CTATCTGGTC TTCTGGGTCA TCATCATCCG TTCCATCATG
AGCTGGGTCA GTCAAGGCCG TAGCCCTATT GAGTATCTGC TGCATCAGTT GACCGAACCG
CTAATGGCAC CGCTCCGTCG CATTATTCCG GTCATGGGCG GCATTGATTT CTCTGCGATG
GCCGTCATTC TGATTCTGTA TATGCTCAAC TATCTGGGCA TGGATCTGTT CCCGGGGCTG
TGGTTCCTGC TGTGA
 
Protein sequence
MLTLTFLVKT LVDLYVMVLL LRIWMQWSRS DFYNPLSQFV VKITQPIVGP LRRILPSLGP 
IDSASLLLAF ILTTIKYPLL LLIQVGAISL SPMNLLVGLI SLIKSAGYLV FWVIIIRSIM
SWVSQGRSPI EYLLHQLTEP LMAPLRRIIP VMGGIDFSAM AVILILYMLN YLGMDLFPGL
WFLL