Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3452 |
Symbol | |
ID | 8134432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 3898984 |
End bp | 3899538 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644866753 |
Product | hypothetical protein |
Protein accession | YP_003019004 |
Protein GI | 253689814 |
COG category | [S] Function unknown |
COG ID | [COG0762] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0294828 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCACCC TGACTTTTCT GGTCAAAACG CTGGTCGACC TCTATGTAAT GGTCCTGCTG CTACGCATCT GGATGCAGTG GTCACGCAGC GATTTCTATA ACCCGCTGTC GCAGTTTGTC GTCAAAATCA CCCAGCCGAT TGTCGGGCCG CTGCGCCGCA TTTTGCCGTC ATTAGGGCCG ATTGACAGCG CCTCGCTGCT GCTGGCTTTT ATTCTCACGA CGATCAAATA CCCGTTACTG CTGTTGATTC AGGTTGGCGC GATTTCCCTC AGCCCAATGA ACCTGCTGGT CGGGCTCATT TCGCTGATTA AATCCGCGGG CTATCTGGTC TTCTGGGTCA TCATCATCCG TTCCATCATG AGCTGGGTCA GTCAAGGCCG TAGCCCTATT GAGTATCTGC TGCATCAGTT GACCGAACCG CTAATGGCAC CGCTCCGTCG CATTATTCCG GTCATGGGCG GCATTGATTT CTCTGCGATG GCCGTCATTC TGATTCTGTA TATGCTCAAC TATCTGGGCA TGGATCTGTT CCCGGGGCTG TGGTTCCTGC TGTGA
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Protein sequence | MLTLTFLVKT LVDLYVMVLL LRIWMQWSRS DFYNPLSQFV VKITQPIVGP LRRILPSLGP IDSASLLLAF ILTTIKYPLL LLIQVGAISL SPMNLLVGLI SLIKSAGYLV FWVIIIRSIM SWVSQGRSPI EYLLHQLTEP LMAPLRRIIP VMGGIDFSAM AVILILYMLN YLGMDLFPGL WFLL
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