| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3446 |
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| Symbol | |
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| ID | 8134426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3891635 |
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| End bp | 3892060 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644866747 |
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| Product | transcriptional repressor NsrR |
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| Protein accession | YP_003018998 |
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| Protein GI | 253689808 |
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| COG category | [K] Transcription |
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| COG ID | [COG1959] Predicted transcriptional regulator |
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| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCAGTTAA CAAGTTTTAC GGATTATGGC TTGCGGGCGC TGATTTATAT GGCATCGCTG
CCGGGCGGGA AAATGACCAG CATTTCTGAG GTAACGGAAG TGTATGGCGT GTCTCGTAAT
CATATGGTCA AAATTATCAA TCAACTTAGT CGTGCTGGGT TGGTGATGGC CGTGCGCGGC
AAGAATGGCG GTATCCGTCT TGGGAAACCA GCAGAAACCA TTCGAATTGG CGATGTTGTG
CGCGAACTAG AGCCGCTTAC GCTGGTTAAC TGTAGCCACG AGTTTTGCCA CATCACGCCG
GCCTGCCGTT TGAAGCAGGT GCTTCAACAG GCGGTACAAA ATTTCCTGCA AGAGCTGGAT
CAATACACGC TGGCTGATAT GGTCAAAGAA AACCCACCGC TTTATAAATT ATTGTTGGTT
GAATGA
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| Protein sequence | MQLTSFTDYG LRALIYMASL PGGKMTSISE VTEVYGVSRN HMVKIINQLS RAGLVMAVRG
KNGGIRLGKP AETIRIGDVV RELEPLTLVN CSHEFCHITP ACRLKQVLQQ AVQNFLQELD
QYTLADMVKE NPPLYKLLLV E
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