Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3444 |
Symbol | |
ID | 8134424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3888298 |
End bp | 3889029 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644866745 |
Product | 23S rRNA (guanosine-2'-O-)-methyltransferase |
Protein accession | YP_003018996 |
Protein GI | 253689806 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.882432 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAAA TTATTTACGG TATCCATGCA GTTAAGGCAC TGCTTGAGCG CGATCCACAG CGTTTTCTGG AAGTTTTTGT TCTGAAAGGA CGCGACGATC GTCGCCTTCA GCCCGTGATT GCGGAGCTGG AAGCGCAGGG CATCGTCATT CAAGTGGCGA ATCGCCAATG GCTGGATAAG CAGGCTGACG ACGCGGTGCA TCAGGGGATC GTAGCGAAGG TCAAAGAAGG GCGGAAATAT CAGGAAAACG ACCTGCCTGC ATTGTTAGAC AATCTGGAAA CGCCTTTCCT GCTGATATTG GACGGCGTGA CCGATCCGCA TAATCTGGGT GCATGCCTGC GTAATGCGGA CGGTGCTGGC GTGCATGCGG TGATCGTGCC ACGCGATCGC TCTGCGCAAC TGAATGCGAC GGTGAAGAAG GTGGCCTGTG GTGCAGCGGA AACCGTACCA GTTATCAGCG TGACCAATCT GGCGCGTACG ATGCGTCTGT TGCAGGAGCG TAATATCTGG ATCGTCGGCA CGGCGGGTGA AGCGGATCAT ACGCTGTACC AAAGCAAGCT GACCGGGCCA CTGGCGCTGG TCATGGGCGC GGAAGGGGAA GGGATGCGTC GCCTGACCCG CGAGCACTGT GATGAGTTGA TCAGTATTCC GATGGCAGGC AGCGTGTCTT CACTGAATGT GTCTGTTGCC ACTGGCGTGT GTCTGTTTGA AGCCGTTCGC CAGCGCGCAT AA
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Protein sequence | MSEIIYGIHA VKALLERDPQ RFLEVFVLKG RDDRRLQPVI AELEAQGIVI QVANRQWLDK QADDAVHQGI VAKVKEGRKY QENDLPALLD NLETPFLLIL DGVTDPHNLG ACLRNADGAG VHAVIVPRDR SAQLNATVKK VACGAAETVP VISVTNLART MRLLQERNIW IVGTAGEADH TLYQSKLTGP LALVMGAEGE GMRRLTREHC DELISIPMAG SVSSLNVSVA TGVCLFEAVR QRA
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