Gene PC1_3444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3444 
Symbol 
ID8134424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3888298 
End bp3889029 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content56% 
IMG OID644866745 
Product23S rRNA (guanosine-2'-O-)-methyltransferase 
Protein accessionYP_003018996 
Protein GI253689806 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID[TIGR00186] rRNA methylase, putative, group 3 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.882432 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAA TTATTTACGG TATCCATGCA GTTAAGGCAC TGCTTGAGCG CGATCCACAG 
CGTTTTCTGG AAGTTTTTGT TCTGAAAGGA CGCGACGATC GTCGCCTTCA GCCCGTGATT
GCGGAGCTGG AAGCGCAGGG CATCGTCATT CAAGTGGCGA ATCGCCAATG GCTGGATAAG
CAGGCTGACG ACGCGGTGCA TCAGGGGATC GTAGCGAAGG TCAAAGAAGG GCGGAAATAT
CAGGAAAACG ACCTGCCTGC ATTGTTAGAC AATCTGGAAA CGCCTTTCCT GCTGATATTG
GACGGCGTGA CCGATCCGCA TAATCTGGGT GCATGCCTGC GTAATGCGGA CGGTGCTGGC
GTGCATGCGG TGATCGTGCC ACGCGATCGC TCTGCGCAAC TGAATGCGAC GGTGAAGAAG
GTGGCCTGTG GTGCAGCGGA AACCGTACCA GTTATCAGCG TGACCAATCT GGCGCGTACG
ATGCGTCTGT TGCAGGAGCG TAATATCTGG ATCGTCGGCA CGGCGGGTGA AGCGGATCAT
ACGCTGTACC AAAGCAAGCT GACCGGGCCA CTGGCGCTGG TCATGGGCGC GGAAGGGGAA
GGGATGCGTC GCCTGACCCG CGAGCACTGT GATGAGTTGA TCAGTATTCC GATGGCAGGC
AGCGTGTCTT CACTGAATGT GTCTGTTGCC ACTGGCGTGT GTCTGTTTGA AGCCGTTCGC
CAGCGCGCAT AA
 
Protein sequence
MSEIIYGIHA VKALLERDPQ RFLEVFVLKG RDDRRLQPVI AELEAQGIVI QVANRQWLDK 
QADDAVHQGI VAKVKEGRKY QENDLPALLD NLETPFLLIL DGVTDPHNLG ACLRNADGAG
VHAVIVPRDR SAQLNATVKK VACGAAETVP VISVTNLART MRLLQERNIW IVGTAGEADH
TLYQSKLTGP LALVMGAEGE GMRRLTREHC DELISIPMAG SVSSLNVSVA TGVCLFEAVR
QRA