Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3433 |
Symbol | rpsR |
ID | 8134413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3879146 |
End bp | 3879373 |
Gene Length | 228 bp |
Protein Length | 75 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644866734 |
Product | 30S ribosomal protein S18 |
Protein accession | YP_003018985 |
Protein GI | 253689795 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0238] Ribosomal protein S18 |
TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00939921 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACGTT ATTTCCGTCG TCGCAAATTC TGCCGTTTCA CCGCGGAAGG CGTTGTAGAG ATTGATTATA AAGATATCGC TACGCTGAAA AACTATATCA CTGAAAGCGG CAAGATTGTT CCGAGCCGTA TCACCGGTAC TCGTGCAAAA TACCAGCGTC AGCTGGCCCG CGCTATCAAG CGTGCGCGTT ACTTGTCTTT GTTGCCGTAC ACTGACCGTC ATCAGTAA
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Protein sequence | MARYFRRRKF CRFTAEGVVE IDYKDIATLK NYITESGKIV PSRITGTRAK YQRQLARAIK RARYLSLLPY TDRHQ
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