Gene PC1_3374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3374 
Symbol 
ID8134354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp3804270 
End bp3804941 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content56% 
IMG OID644866675 
Producthypothetical protein 
Protein accessionYP_003018926 
Protein GI253689736 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0602] Organic radical activating enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTACC CGATTAATGA AATGTTCCAG ACGTTACAGG GCGAAGGCTA TTTTACCGGT 
GTGCCGGCAG TGTTTGTGCG CCTGCAAGGG TGCCCGGTCG GCTGTAGCTG GTGCGATACC 
AAACACACCT GGGACAAACT GGCAGAGCGG GAAACCTCAT TGGATCAGGT GCTGGTAAAA 
ACGGAAGAAA GCGATGCCTG GGGCGCGGCG AGTGCGGACG ATATTCTGGC GCTGATGACG 
CAGCAGGGTT ACACGGCACG CCACATCGTG ATCACCGGCG GTGAGCCGTG TATCCACGAT 
TTGACACCGC TGACGCTACA GTTGGAAAAG CAGGGCTTTA GTTGCCAGAT TGAAACCAGC 
GGCACCCACG ACGTGCGCTG TTCGCCAAAA ACCTGGGTGA CGGTATCGCC GAAGGTGAAT 
ATGCGCGGCG GCATGAAGGT GCTCGATCAG GCACTGCAAC GGGCGGATGA GATCAAACAC 
CCGGTGGCGC GTGAACGTGA TATTGAAGCG TTGGATGCGC TACTGGCGCG GCTTGATGAT 
GATAAGCCGC GCATCGTAGC GCTACAGCCG ATCAGCCAGA AAGACGATGC GACTAAACTG 
TGTATTGCGA CCTGCATCGC CCGTAACTGG CGGCTTTCTA TGCAGACACA TAAATACCTG 
AATATTGCCT GA
 
Protein sequence
MQYPINEMFQ TLQGEGYFTG VPAVFVRLQG CPVGCSWCDT KHTWDKLAER ETSLDQVLVK 
TEESDAWGAA SADDILALMT QQGYTARHIV ITGGEPCIHD LTPLTLQLEK QGFSCQIETS 
GTHDVRCSPK TWVTVSPKVN MRGGMKVLDQ ALQRADEIKH PVARERDIEA LDALLARLDD 
DKPRIVALQP ISQKDDATKL CIATCIARNW RLSMQTHKYL NIA