Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3344 |
Symbol | metQ |
ID | 8134324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 3772395 |
End bp | 3773210 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644866645 |
Product | DL-methionine transporter substrate-binding subunit |
Protein accession | YP_003018896 |
Protein GI | 253689706 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00065013 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGATTA AACTGAAATC TATTGCGACC ATTGGCGCAC TTATTGGTGC TCTGGCGTTA GCTGGATGTG GTCAGGAAGA AAAGAATCCT AATCATATTA AAGTCGGCGT TATTGTTGGC GCAGAACAGC AGGTTGCGGA AGTCGCGCAG AAAGTGGCAA AAGACAAATA CGGCCTGGAC GTTGAGTTAG TCACATTTAA CGACTACGTG TTGCCAAATG AAGCCCTGAG CAAGGGTGAC ATCGATCTGA ATGCCTTCCA GCACAAGCCT TATCTGGATC AGCAGATCAA AGATCGTGGT TATAAACTGG TTTCTGTCGG CAATAGCTTT GTCTACCCGA TTGCAGGTTA CTCCAAAAAA ATTAAATCAC TGAATGAGCT GCAAGATGGC GCTCAGGTTG CGCTGCCAAA CGACCCGACC AACCTAGGTC GTTCTCTGCT GCTGCTGCAA AAAGTTGGTT TGATTAAACT GAAAGACAAC GTTGGTCTGC TGCCAACCGT ACTGGATGTG ACTGAAAATC CGAAGAATAT CAAACTGGTT GAACTGGAAG CGCCACAGCT ACCACGCTCT TTAGATGACG CGCAAATCGC ACTGGCTGTC ATTAACACCA CTTACGCTAG CCAGATTAAC CTGACACCAA CGAAAGATGG CCTGTTTGTT GAAGAGAAAG ACTCTCCGTA TGTGAACCTA CTGGTTTCAC GCGAAGACAA CAAAGACGCT GAAAACGTGA AGAAATTCGT TCAGGCCTAC CAGTCTGATG AAGTAAACGA TGCAGCAAAT AAAATCTTTA ATGGCGGCGC GGTAAAAGGC TGGTAA
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Protein sequence | MAIKLKSIAT IGALIGALAL AGCGQEEKNP NHIKVGVIVG AEQQVAEVAQ KVAKDKYGLD VELVTFNDYV LPNEALSKGD IDLNAFQHKP YLDQQIKDRG YKLVSVGNSF VYPIAGYSKK IKSLNELQDG AQVALPNDPT NLGRSLLLLQ KVGLIKLKDN VGLLPTVLDV TENPKNIKLV ELEAPQLPRS LDDAQIALAV INTTYASQIN LTPTKDGLFV EEKDSPYVNL LVSREDNKDA ENVKKFVQAY QSDEVNDAAN KIFNGGAVKG W
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