Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3343 |
Symbol | |
ID | 8134323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 3771678 |
End bp | 3772331 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644866644 |
Product | DL-methionine transporter permease subunit |
Protein accession | YP_003018895 |
Protein GI | 253689705 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2011] ABC-type metal ion transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000540247 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTGAAG CAATGATGTG GTTAATGGCT AAGGGAGTAT GGGAAACCGT CGCGATGACG TTCGTTTCTG GTTTCTTTGG CTTTGTGCTT GGCTTACCTG TGGGAGTCTT ATTGTATACC ACGCGTCCAG GGCAGATTAT CGCTAATCCA AAGCTCTACC GGACCGTTTC TGCACTGGTA AACATTTTCC GCTCGATTCC GTTCATTATT TTACTGGTAT GGATGATTCC TTTTACTCGT GTGATTGTTG GAACATCCAT CGGCCTGCAA GCGGCGATCG TTCCTCTCAC CGTCGGTGCC GCACCGTTTA TTGCCCGCAT GGTGGAAAAC GCGCTGCTTG AAATTCCGAC GGGTCTGATT GAAGCCGCAC GGGCGATGGG CGCAACGCCA ATGCAAATCA TCAGAAAGAT ACTACTGCCA GAAGCATTAC CGGGCCTTAT TAATGCTGCA ACCATCACGC TAATTACGCT CGTAGGCTAT TCTGCTATGG GTGGAGCCGT GGGTGCAGGC GGCTTAGGTC AAATTGGTTA TCAGTATGGC TATATTGGTT ATAACGCGAC GGTCATGAAT ACGGTATTAA TATTACTGGT TGTTTTGGTT TACCTGATTC AATTCTGCGG CGACAGGGCA GTAAAAGCTG TCACACACAA GTAA
|
Protein sequence | MSEAMMWLMA KGVWETVAMT FVSGFFGFVL GLPVGVLLYT TRPGQIIANP KLYRTVSALV NIFRSIPFII LLVWMIPFTR VIVGTSIGLQ AAIVPLTVGA APFIARMVEN ALLEIPTGLI EAARAMGATP MQIIRKILLP EALPGLINAA TITLITLVGY SAMGGAVGAG GLGQIGYQYG YIGYNATVMN TVLILLVVLV YLIQFCGDRA VKAVTHK
|
| |