| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3332 |
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| Symbol | |
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| ID | 8134305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3753305 |
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| End bp | 3754489 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644866626 |
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| Product | Na+ dependent nucleoside transporter domain protein |
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| Protein accession | YP_003018884 |
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| Protein GI | 253689694 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1972] Nucleoside permease |
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| TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.2382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACAGG TTTTACATTT CATTTTGGCA ACGGCGGCAA TTTTTTTGCT GGCGTTACTC
GTCAGCCACG ACAGAAAGCG TATTCGGCTG CGCTTTATTG TTCAGTTGCT GGTCATTGAG
GTTTTGCTGG CCTATTTCCT TTTACATTCC AGCATTGGGC TTAACGCGAT TAGCTCGTTT
GCCGGCTTGT TTGAAAAGCT ATTATCTTTC GCCAATCAAG GAACCGACTT CGTGTTTGGC
GGCATGAACG CACAAGGGCT TTCCTTTATC TTCCTCAATG TGCTCTGCCC TATCGTCTTT
ATTTCCGCGC TGATCGGCAT TTTGCAGCAC TGGCGAATTT TACCGCTGAT TATCAAAGGG
ATTGGTACGT TGTTGTCCAA GGTCAACGGG ATGGGGAAAC TGGAGTCGTT TAACGCCGTC
AGTACGCTGA TGCTGGGGCA GTCGGAGAAT TTTATCGTCT ATAAAGGCAT CATCGCCGAC
ATGTCGCCAC GGCGGATGTA CACGATGGCC GCGACGGCAA TGTCGACCGT TTCTATGTCG
ATCATCAGCG CCTACATGAC CATGCTGGAC GCCAAATACG TCGTTGCAGC GCTGATTCTG
AATATGTTCA GCACCTTTAT CGTTCTGTCG ATCATCAACC CTTACCAGCC TGACGACGAA
CCAGAACTGA AGCTGGAAAA GCTGCACGAA GACCAAAGCT TCTTTGAAAT GCTGGGAGAA
TACATTCTTG CCGGTTTTAA AGTGGCGATG ATTATTATGG CGATGCTGAT CGGTTTCGTG
GCCTTGATTG CCGCCGTGAA TGCGCTGTTC AGCACCGTCT TCGGCGTTAG CTTCCAGGCG
ATCATGGGCT ATGTCTTTTC ACCGCTGGCC TGGCTGATCG GCATTCCCTC TTCCGATATC
CTGAACGCAG GCAGCATCAT GGCTACCAAG CTGGTGGCGA ATGAATTCGT TGCCATGATT
GAACTGAAGA AGATTGCGGC AGAGATGTCA CCACGCGGGC TGGGCATTTT GTCCGTGTTC
CTGATCTCCT TCGCCAACTT CGCGTCAATC GGCATTATCG CGGGCGCCAT CAAAGGGCTG
AATGAAGCAC AGGGCAACGT GGTATCGCGC TTCGGCCTGA AGCTGGTTTA TGGCTCTACG
CTGGTGAGTT TGCTGTCTGC GGCAGTGGCG GGACTGGTGC TGTAG
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| Protein sequence | MSQVLHFILA TAAIFLLALL VSHDRKRIRL RFIVQLLVIE VLLAYFLLHS SIGLNAISSF
AGLFEKLLSF ANQGTDFVFG GMNAQGLSFI FLNVLCPIVF ISALIGILQH WRILPLIIKG
IGTLLSKVNG MGKLESFNAV STLMLGQSEN FIVYKGIIAD MSPRRMYTMA ATAMSTVSMS
IISAYMTMLD AKYVVAALIL NMFSTFIVLS IINPYQPDDE PELKLEKLHE DQSFFEMLGE
YILAGFKVAM IIMAMLIGFV ALIAAVNALF STVFGVSFQA IMGYVFSPLA WLIGIPSSDI
LNAGSIMATK LVANEFVAMI ELKKIAAEMS PRGLGILSVF LISFANFASI GIIAGAIKGL
NEAQGNVVSR FGLKLVYGST LVSLLSAAVA GLVL
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