| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3319 |
|---|
| Symbol | |
|---|
| ID | 8134292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 3738985 |
|---|
| End bp | 3739377 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644866613 |
|---|
| Product | Glyoxalase/bleomycin resistance protein/dioxygenase |
|---|
| Protein accession | YP_003018871 |
|---|
| Protein GI | 253689681 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3607] Predicted lactoylglutathione lyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTAGATC ACCTGAGCAT CCCGGTGAGG GATATTGCCC GTAGCCGACA CTTTTATGAA
GCTGCACTCA AGCCGTTGGG ATATTGCCTG ATTAAGGACA TGTCATTTGC CGTCAGTTTT
GCGGTAACGG AAGGATATGG CGAGTCGAGC GATCCCGGCG GTGAGTTCTG GATTTATCAG
TCAAAGGGCG AACCCTGTCC GGCGGTGCAT TTTGCGTTCA GCGCCGCCTC GCGAGAGCAT
GTAGATGCTT TTTTTGCTGC CGCGATAGCG GTGGGAGGTC GCGATAATGG GCCGCCGGGG
CTGCGCCCGA ATTATCATCA GGATTATTAC GCCGCATTTG TGCACGATCC CGATGGATAC
AATATTGAAG CGGTCTATCA CCGCCAGCCT TGA
|
|---|
| Protein sequence | MLDHLSIPVR DIARSRHFYE AALKPLGYCL IKDMSFAVSF AVTEGYGESS DPGGEFWIYQ
SKGEPCPAVH FAFSAASREH VDAFFAAAIA VGGRDNGPPG LRPNYHQDYY AAFVHDPDGY
NIEAVYHRQP
|
|---|
| |